G1899751


Basic Information

Item Value
gene id G1899751
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 7736338 ~ 7736909 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2172917
ATAACTTCCTGCCTAGCAATAAAGATGTAAAGTGATACAGGgaataaactgttccttctcacTTAATGTGACCTCGACCCCCTTCATCACTAATCTACGGCTCTCCACCCTTATCAGCCTGCCACGTGATCGTTTCCCCATGCACTCagtacattccaagcttaattgcacccaccatatacattcctccGACATATAACCACTAACTTCTGGTGTAAACCCTCTACTATGGCACCCCTCATTGTCTCTAGCATAACTAATGATTCATAATATTTAAAAGTTCAGAAATCCGGACCCATCGCCATCGATACACGGTAGTAGTCCGTTATAGAGCAATGATGGCCCCGGCTTGTGTAGTGATAAAGTATGTGCAGTATACATACAGTTTACTCATGTACCCACGTTGCCTTTTTATAGCCATGCAGTTCAGACTAAGCCTAGTCCTGGAATAAGAGATTCTCCATTGAGAATGTGTTTTATTCCAGGACTACGCTTAATCTATGTCAGGAAACCGGCCCCAAGAGACATGACTCTTAAGGGatggattcaatccgtatcgcagaAGTATCCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2172917 True 572 lncRNA 0.44 1 7736338 7736909

Neighbor

gene id symbol gene type direction distance location
LOC110503640 NA coding downstream 221332 7512805 ~ 7515006 (-)
LOC110503637 LOC106612664 coding downstream 229086 7504941 ~ 7507252 (-)
LOC110503632 LOC106612668 coding downstream 296874 7432304 ~ 7439464 (-)
spint2 LOC106612675 coding downstream 440866 7272344 ~ 7295472 (-)
LOC110503626 LOC106612677 coding downstream 479674 7193970 ~ 7256664 (-)
LOC110503654 trad1 coding upstream 1544 7738453 ~ 7746131 (-)
LOC110503656 LOC106612654 coding upstream 135453 7872362 ~ 7875185 (-)
LOC110503659 NA coding upstream 201082 7937991 ~ 7947837 (-)
LOC110503311 LOC106612649 coding upstream 257632 7994541 ~ 8035329 (-)
LOC110503663 tp53i13 coding upstream 326835 8063744 ~ 8069386 (-)
G1899749 NA non-coding downstream 5218 7730899 ~ 7731120 (-)
G1899748 NA non-coding downstream 6049 7730072 ~ 7730289 (-)
G1899742 NA non-coding downstream 6765 7729004 ~ 7729573 (-)
G1899739 NA non-coding downstream 20192 7715839 ~ 7716146 (-)
G1899689 NA non-coding downstream 39982 7694150 ~ 7696356 (-)
G1899755 NA non-coding upstream 8678 7745587 ~ 7745798 (-)
G1899757 NA non-coding upstream 11041 7747950 ~ 7748261 (-)
G1899760 NA non-coding upstream 15665 7752574 ~ 7781875 (-)
G1899770 NA non-coding upstream 48889 7785798 ~ 7786242 (-)
G1899772 NA non-coding upstream 50259 7787168 ~ 7820573 (-)
LOC110503590 LOC106612705 other downstream 1276273 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 1504530 6181377 ~ 6231808 (-)
G1896030 NA other downstream 1867120 5868896 ~ 5869218 (-)
G1894611 NA other downstream 3382402 4353578 ~ 4353936 (-)
si:dkey-202l22.3 LOC106612399 other downstream 3441860 4289886 ~ 4294714 (-)
G1899875 NA other upstream 309870 8046779 ~ 8047974 (-)
LOC110503680 LOC106612628 other upstream 1833962 9570867 ~ 9579939 (-)
G1901072 LOC107388308 other upstream 2268463 10005372 ~ 10012354 (-)
G1901206 NA other upstream 2468311 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 2662133 10399042 ~ 10399857 (-)

Expression


Co-expression Network