G1899772



Basic Information


Item Value
gene id G1899772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 7787168 ~ 7820573 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2172943
CTTAACTCCAGTTAGACAGGTATTAACACCCCTCTCAGGGGACCGGAGGAGGGCTGCCAATCAACCAGGAGGAACAAGGAGGGTTAGGAGACAGGAACCCAGAACCCTCAACCCTTCTCAACCGCAACAACGCACTGGACTGACTGGGTTACTATTCTAAGCCAGTAAGCTagtacaaaaacacacacacacacacacacacacacacacaaaaaaaca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2172943 True 219 lncRNA 0.49 2 7787168 7820573

Neighbor


gene id symbol gene type direction distance location
LOC110503654 trad1 coding downstream 41037 7738453 ~ 7746131 (-)
LOC110503655 LOC106580791 coding downstream 48862 7735133 ~ 7738306 (-)
LOC110503640 NA coding downstream 272162 7512805 ~ 7515006 (-)
LOC110503637 LOC106612664 coding downstream 279916 7504941 ~ 7507252 (-)
LOC110503632 LOC106612668 coding downstream 347704 7432304 ~ 7439464 (-)
LOC110503656 LOC106612654 coding upstream 51789 7872362 ~ 7875185 (-)
LOC110503659 NA coding upstream 117418 7937991 ~ 7947837 (-)
LOC110503311 LOC106612649 coding upstream 173968 7994541 ~ 8035329 (-)
LOC110503663 tp53i13 coding upstream 243171 8063744 ~ 8069386 (-)
LOC118944074 NA coding upstream 718449 8539022 ~ 8546999 (-)
G1899770 NA non-coding downstream 926 7785798 ~ 7786242 (-)
G1899760 NA non-coding downstream 5293 7752574 ~ 7781875 (-)
G1899757 NA non-coding downstream 38907 7747950 ~ 7748261 (-)
G1899755 NA non-coding downstream 41370 7745587 ~ 7745798 (-)
G1899751 NA non-coding downstream 50259 7736338 ~ 7736909 (-)
G1899793 NA non-coding upstream 3386 7823959 ~ 7824305 (-)
G1899799 NA non-coding upstream 10301 7830874 ~ 7831204 (-)
G1899822 NA non-coding upstream 49030 7869603 ~ 7872296 (-)
G1899843 NA non-coding upstream 96405 7916978 ~ 7917397 (-)
G1899917 NA non-coding upstream 264786 8085359 ~ 8086215 (-)
LOC110503590 LOC106612705 other downstream 1327103 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 1555360 6181377 ~ 6231808 (-)
G1896030 NA other downstream 1917950 5868896 ~ 5869218 (-)
G1894611 NA other downstream 3433232 4353578 ~ 4353936 (-)
si:dkey-202l22.3 LOC106612399 other downstream 3492690 4289886 ~ 4294714 (-)
G1899875 NA other upstream 226206 8046779 ~ 8047974 (-)
LOC110503680 LOC106612628 other upstream 1750298 9570867 ~ 9579939 (-)
G1901072 LOC107388308 other upstream 2184799 10005372 ~ 10012354 (-)
G1901206 NA other upstream 2384647 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 2578469 10399042 ~ 10399857 (-)

Expression



Co-expression Network