Gene
RNA
| Item | Value |
|---|---|
| gene id | G1899917 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 8085359 ~ 8086215 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2173112 | False | 446 | lncRNA | 0.42 | 2 | 8085359 | 8086215 |
| TU2173111 | True | 207 | lncRNA | 0.43 | 2 | 8085858 | 8086215 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503663 | tp53i13 | coding | downstream | 15973 | 8063744 ~ 8069386 (-) |
| LOC110503311 | LOC106612649 | coding | downstream | 50030 | 7994541 ~ 8035329 (-) |
| LOC110503659 | NA | coding | downstream | 137522 | 7937991 ~ 7947837 (-) |
| LOC110503656 | LOC106612654 | coding | downstream | 210174 | 7872362 ~ 7875185 (-) |
| LOC110503654 | trad1 | coding | downstream | 339228 | 7738453 ~ 7746131 (-) |
| LOC118944074 | NA | coding | upstream | 452807 | 8539022 ~ 8546999 (-) |
| LOC110503666 | neum | coding | upstream | 1187740 | 9273955 ~ 9283929 (-) |
| mpzl3 | LOC106612639 | coding | upstream | 1199761 | 9285976 ~ 9292964 (-) |
| LOC110503667 | LOC106612638 | coding | upstream | 1222835 | 9309050 ~ 9330335 (-) |
| LOC110503669 | LOC100136515 | coding | upstream | 1252517 | 9338732 ~ 9346765 (-) |
| G1899843 | NA | non-coding | downstream | 167962 | 7916978 ~ 7917397 (-) |
| G1899822 | NA | non-coding | downstream | 213063 | 7869603 ~ 7872296 (-) |
| G1899799 | NA | non-coding | downstream | 254155 | 7830874 ~ 7831204 (-) |
| G1899793 | NA | non-coding | downstream | 261054 | 7823959 ~ 7824305 (-) |
| G1899772 | NA | non-coding | downstream | 264786 | 7787168 ~ 7820573 (-) |
| G1899977 | NA | non-coding | upstream | 73230 | 8159445 ~ 8199230 (-) |
| G1900056 | NA | non-coding | upstream | 200229 | 8286444 ~ 8292797 (-) |
| G1900130 | NA | non-coding | upstream | 304068 | 8390283 ~ 8395234 (-) |
| G1900191 | NA | non-coding | upstream | 402461 | 8488676 ~ 8488916 (-) |
| G1900351 | NA | non-coding | upstream | 666680 | 8752895 ~ 8753902 (-) |
| G1899875 | NA | other | downstream | 37385 | 8046779 ~ 8047974 (-) |
| LOC110503590 | LOC106612705 | other | downstream | 1625294 | 6371958 ~ 6472758 (-) |
| LOC118944082 | NA | other | downstream | 1853551 | 6181377 ~ 6231808 (-) |
| G1896030 | NA | other | downstream | 2216141 | 5868896 ~ 5869218 (-) |
| G1894611 | NA | other | downstream | 3731423 | 4353578 ~ 4353936 (-) |
| LOC110503680 | LOC106612628 | other | upstream | 1484656 | 9570867 ~ 9579939 (-) |
| G1901072 | LOC107388308 | other | upstream | 1919157 | 10005372 ~ 10012354 (-) |
| G1901206 | NA | other | upstream | 2119005 | 10205220 ~ 10205948 (-) |
| G1901302 | LOC106612600 | other | upstream | 2312827 | 10399042 ~ 10399857 (-) |
| G1901405 | NA | other | upstream | 2530709 | 10616924 ~ 10617481 (-) |
