G1900807


Basic Information

Item Value
gene id G1900807
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 9507692 ~ 9508289 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2174031
caaatataaaatatatttttatttgtttaacacttttttggttactacatgattccatatgtgttttgatgtcttcactattattctacaatgatgagatgtgtccaaacttttgactggtactgtatattgtacCTGTGTGGCTGTGTAGGTGATGATGTCACTCTGTTGTCATGTACATTGTACCTGTGTGGCTGTGTAGGTGATGATGTGCTGCACGTCTCTCCAGGTGAGACAGGGCCGGACCTGCAGCATCAGAGCCACCATGCCAGCCGCCAGGGGTGCCGCCGCCGAGGTGCCCGTGTGCCCGTCAGTACAGCCCGTgccctgctgcagtgaccagtCTGACGTCacctacacagtacacacacacagagaagagtCATAAACATGTATACGAATCGCACACGCCATTACAAACAGTCAGTGGTAAGGAGCTATGGGACGACtagggaggaagagggaaaagCCAGAAAAGATGGAGAGTTGGAGATGGAGGGGCTG

Function

NR:

description
PREDICTED: proprotein convertase subtilisin/kexin type 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2174031 True 504 lncRNA 0.48 2 9507692 9508289

Neighbor

gene id symbol gene type direction distance location
LOC110503673 cep164 coding downstream 49835 9439390 ~ 9457857 (-)
LOC110503671 LOC106612637 coding downstream 106303 9357011 ~ 9401389 (-)
LOC110503672 tmm25 coding downstream 151691 9347752 ~ 9356001 (-)
LOC110503669 LOC100136515 coding downstream 160927 9338732 ~ 9346765 (-)
LOC110503667 LOC106612638 coding downstream 177357 9309050 ~ 9330335 (-)
LOC110503678 LOC106612633 coding upstream 11641 9519930 ~ 9525556 (-)
cbln18 LOC106612737 coding upstream 25313 9533602 ~ 9536466 (-)
cbln20 LOC106612736 coding upstream 36516 9544805 ~ 9546072 (-)
LOC110503680 LOC106612628 coding upstream 62578 9570867 ~ 9579939 (-)
LOC110503681 LOC106612627 coding upstream 78908 9587197 ~ 9593083 (-)
G1900818 NA non-coding downstream 32114 9475367 ~ 9475578 (-)
G1900816 NA non-coding downstream 35218 9471700 ~ 9472474 (-)
G1900715 NA non-coding downstream 36595 9468967 ~ 9471097 (-)
G1900815 NA non-coding downstream 39050 9468388 ~ 9468642 (-)
G1900810 NA non-coding downstream 46897 9460549 ~ 9460795 (-)
G1900844 NA non-coding upstream 8270 9516559 ~ 9519131 (-)
G1900855 NA non-coding upstream 20391 9528680 ~ 9528896 (-)
G1900872 NA non-coding upstream 50877 9559166 ~ 9559405 (-)
G1900875 NA non-coding upstream 58057 9566346 ~ 9566751 (-)
G1900884 NA non-coding upstream 87293 9595582 ~ 9595911 (-)
G1899875 NA other downstream 1459718 8046779 ~ 8047974 (-)
LOC110503590 LOC106612705 other downstream 3047627 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 3275884 6181377 ~ 6231808 (-)
G1896030 NA other downstream 3638474 5868896 ~ 5869218 (-)
G1894611 NA other downstream 5153756 4353578 ~ 4353936 (-)
G1901072 LOC107388308 other upstream 497083 10005372 ~ 10012354 (-)
G1901206 NA other upstream 696931 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 890753 10399042 ~ 10399857 (-)
G1901405 NA other upstream 1108635 10616924 ~ 10617481 (-)

Expression


Co-expression Network