Gene
RNA
| Item | Value |
|---|---|
| gene id | G1900872 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 9559166 ~ 9559405 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2174103 | True | 240 | lncRNA | 0.35 | 1 | 9559166 | 9559405 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cbln20 | LOC106612736 | coding | downstream | 13094 | 9544805 ~ 9546072 (-) |
| cbln18 | LOC106612737 | coding | downstream | 22700 | 9533602 ~ 9536466 (-) |
| LOC110503678 | LOC106612633 | coding | downstream | 33610 | 9519930 ~ 9525556 (-) |
| LOC110503673 | cep164 | coding | downstream | 101309 | 9439390 ~ 9457857 (-) |
| LOC110503671 | LOC106612637 | coding | downstream | 157777 | 9357011 ~ 9401389 (-) |
| LOC110503680 | LOC106612628 | coding | upstream | 11462 | 9570867 ~ 9579939 (-) |
| LOC110503681 | LOC106612627 | coding | upstream | 27792 | 9587197 ~ 9593083 (-) |
| LOC110503684 | LOC106592295 | coding | upstream | 46920 | 9606325 ~ 9608246 (-) |
| LOC110503686 | LOC106592295 | coding | upstream | 93165 | 9652570 ~ 9654648 (-) |
| dpf1 | dpf1 | coding | upstream | 98566 | 9657971 ~ 9730313 (-) |
| G1900855 | NA | non-coding | downstream | 30270 | 9528680 ~ 9528896 (-) |
| G1900844 | NA | non-coding | downstream | 40035 | 9516559 ~ 9519131 (-) |
| G1900807 | NA | non-coding | downstream | 50877 | 9507692 ~ 9508289 (-) |
| G1900818 | NA | non-coding | downstream | 83588 | 9475367 ~ 9475578 (-) |
| G1900816 | NA | non-coding | downstream | 86692 | 9471700 ~ 9472474 (-) |
| G1900875 | NA | non-coding | upstream | 6941 | 9566346 ~ 9566751 (-) |
| G1900884 | NA | non-coding | upstream | 36177 | 9595582 ~ 9595911 (-) |
| G1900901 | NA | non-coding | upstream | 54653 | 9614058 ~ 9614979 (-) |
| G1900903 | NA | non-coding | upstream | 58143 | 9617548 ~ 9629252 (-) |
| G1900922 | NA | non-coding | upstream | 123023 | 9682428 ~ 9697449 (-) |
| G1899875 | NA | other | downstream | 1511192 | 8046779 ~ 8047974 (-) |
| LOC110503590 | LOC106612705 | other | downstream | 3099101 | 6371958 ~ 6472758 (-) |
| LOC118944082 | NA | other | downstream | 3327358 | 6181377 ~ 6231808 (-) |
| G1896030 | NA | other | downstream | 3689948 | 5868896 ~ 5869218 (-) |
| G1894611 | NA | other | downstream | 5205230 | 4353578 ~ 4353936 (-) |
| G1901072 | LOC107388308 | other | upstream | 445967 | 10005372 ~ 10012354 (-) |
| G1901206 | NA | other | upstream | 645815 | 10205220 ~ 10205948 (-) |
| G1901302 | LOC106612600 | other | upstream | 839637 | 10399042 ~ 10399857 (-) |
| G1901405 | NA | other | upstream | 1057519 | 10616924 ~ 10617481 (-) |
