Gene
RNA
| Item | Value |
|---|---|
| gene id | G1900884 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 9595582 ~ 9595911 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2174115 | True | 330 | lncRNA | 0.40 | 1 | 9595582 | 9595911 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503681 | LOC106612627 | coding | downstream | 2499 | 9587197 ~ 9593083 (-) |
| LOC110503680 | LOC106612628 | coding | downstream | 15643 | 9570867 ~ 9579939 (-) |
| cbln20 | LOC106612736 | coding | downstream | 49510 | 9544805 ~ 9546072 (-) |
| cbln18 | LOC106612737 | coding | downstream | 59116 | 9533602 ~ 9536466 (-) |
| LOC110503678 | LOC106612633 | coding | downstream | 70026 | 9519930 ~ 9525556 (-) |
| LOC110503684 | LOC106592295 | coding | upstream | 10414 | 9606325 ~ 9608246 (-) |
| LOC110503686 | LOC106592295 | coding | upstream | 56659 | 9652570 ~ 9654648 (-) |
| dpf1 | dpf1 | coding | upstream | 62060 | 9657971 ~ 9730313 (-) |
| LOC110503314 | LOC106612624 | coding | upstream | 175513 | 9771424 ~ 9846389 (-) |
| LOC110503688 | LOC106612623 | coding | upstream | 252311 | 9848222 ~ 9862581 (-) |
| G1900875 | NA | non-coding | downstream | 28831 | 9566346 ~ 9566751 (-) |
| G1900872 | NA | non-coding | downstream | 36177 | 9559166 ~ 9559405 (-) |
| G1900855 | NA | non-coding | downstream | 66686 | 9528680 ~ 9528896 (-) |
| G1900844 | NA | non-coding | downstream | 76451 | 9516559 ~ 9519131 (-) |
| G1900807 | NA | non-coding | downstream | 87293 | 9507692 ~ 9508289 (-) |
| G1900901 | NA | non-coding | upstream | 18147 | 9614058 ~ 9614979 (-) |
| G1900903 | NA | non-coding | upstream | 21637 | 9617548 ~ 9629252 (-) |
| G1900922 | NA | non-coding | upstream | 86517 | 9682428 ~ 9697449 (-) |
| G1900945 | NA | non-coding | upstream | 135783 | 9731694 ~ 9731937 (-) |
| G1900949 | NA | non-coding | upstream | 139049 | 9734960 ~ 9735248 (-) |
| G1899875 | NA | other | downstream | 1547608 | 8046779 ~ 8047974 (-) |
| LOC110503590 | LOC106612705 | other | downstream | 3135517 | 6371958 ~ 6472758 (-) |
| LOC118944082 | NA | other | downstream | 3363774 | 6181377 ~ 6231808 (-) |
| G1896030 | NA | other | downstream | 3726364 | 5868896 ~ 5869218 (-) |
| G1901072 | LOC107388308 | other | upstream | 409461 | 10005372 ~ 10012354 (-) |
| G1901206 | NA | other | upstream | 609309 | 10205220 ~ 10205948 (-) |
| G1901302 | LOC106612600 | other | upstream | 803131 | 10399042 ~ 10399857 (-) |
| G1901405 | NA | other | upstream | 1021013 | 10616924 ~ 10617481 (-) |
| G1901516 | NA | other | upstream | 1257920 | 10853831 ~ 10856437 (-) |
