Gene
RNA
| Item | Value |
|---|---|
| gene id | G1901071 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 9932534 ~ 9937452 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tripartite motif-containing protein 16-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2174327 | True | 264 | lncRNA | 0.54 | 2 | 9932534 | 9937452 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503691 | LOC106612619 | coding | downstream | 34596 | 9892221 ~ 9897938 (-) |
| LOC110503315 | NA | coding | downstream | 45473 | 9880097 ~ 9887061 (-) |
| LOC110503688 | LOC106612623 | coding | downstream | 69953 | 9848222 ~ 9862581 (-) |
| LOC110503314 | LOC106612624 | coding | downstream | 86145 | 9771424 ~ 9846389 (-) |
| dpf1 | dpf1 | coding | downstream | 202221 | 9657971 ~ 9730313 (-) |
| LOC110503696 | LOC106612616 | coding | upstream | 41561 | 9979013 ~ 9984042 (-) |
| LOC110503700 | LOC107388308 | coding | upstream | 67888 | 10005340 ~ 10008987 (-) |
| LOC110503698 | LOC107388308 | coding | upstream | 71909 | 10009361 ~ 10012404 (-) |
| LOC110503704 | LOC106612609 | coding | upstream | 167114 | 10104566 ~ 10114248 (-) |
| LOC110503316 | prss16 | coding | upstream | 192440 | 10129892 ~ 10139994 (-) |
| G1900968 | NA | non-coding | downstream | 9856 | 9921871 ~ 9922678 (-) |
| G1900970 | NA | non-coding | downstream | 109501 | 9757960 ~ 9823033 (-) |
| G1900949 | NA | non-coding | downstream | 197286 | 9734960 ~ 9735248 (-) |
| G1900945 | NA | non-coding | downstream | 200597 | 9731694 ~ 9731937 (-) |
| G1900922 | NA | non-coding | downstream | 235085 | 9682428 ~ 9697449 (-) |
| G1901082 | NA | non-coding | upstream | 35342 | 9972794 ~ 9973426 (-) |
| G1901087 | NA | non-coding | upstream | 46856 | 9984308 ~ 9985894 (-) |
| G1901088 | NA | non-coding | upstream | 48690 | 9986142 ~ 9986610 (-) |
| G1901100 | NA | non-coding | upstream | 89401 | 10026853 ~ 10027069 (-) |
| G1901126 | NA | non-coding | upstream | 134786 | 10072238 ~ 10072472 (-) |
| LOC110503680 | LOC106612628 | other | downstream | 358385 | 9570867 ~ 9579939 (-) |
| G1899875 | NA | other | downstream | 1884560 | 8046779 ~ 8047974 (-) |
| LOC110503590 | LOC106612705 | other | downstream | 3472469 | 6371958 ~ 6472758 (-) |
| LOC118944082 | NA | other | downstream | 3700726 | 6181377 ~ 6231808 (-) |
| G1896030 | NA | other | downstream | 4063316 | 5868896 ~ 5869218 (-) |
| G1901072 | LOC107388308 | other | upstream | 67920 | 10005372 ~ 10012354 (-) |
| G1901206 | NA | other | upstream | 267768 | 10205220 ~ 10205948 (-) |
| G1901302 | LOC106612600 | other | upstream | 461590 | 10399042 ~ 10399857 (-) |
| G1901405 | NA | other | upstream | 679472 | 10616924 ~ 10617481 (-) |
| G1901516 | NA | other | upstream | 916379 | 10853831 ~ 10856437 (-) |
