G1901137



Basic Information


Item Value
gene id G1901137
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 10084870 ~ 10085101 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2174402
CAGTTTGATGCAAGGCAAGCTATTTTAAATATCAAGTTCTCTAAATATCGATGCATATCGTCAACTAAATTTGGGGAAGAAAAATGAACTCCCCCTTTTTCACTTCATAatttgcagtgccttcagaaagtatttatacccttgacttattccacattttgttgtgttacagcctgaattcaaaatggattacatgttTTTTTGCCCGTCAcccaactacacacaatacccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2174402 True 232 lncRNA 0.36 1 10084870 10085101

Neighbor


gene id symbol gene type direction distance location
LOC110503698 LOC107388308 coding downstream 72466 10009361 ~ 10012404 (-)
LOC110503700 LOC107388308 coding downstream 75883 10005340 ~ 10008987 (-)
LOC110503696 LOC106612616 coding downstream 100828 9979013 ~ 9984042 (-)
LOC110503694 NA coding downstream 143102 9924311 ~ 9941768 (-)
LOC110503691 LOC106612619 coding downstream 186932 9892221 ~ 9897938 (-)
LOC110503704 LOC106612609 coding upstream 19465 10104566 ~ 10114248 (-)
LOC110503316 prss16 coding upstream 44791 10129892 ~ 10139994 (-)
LOC110503705 hnrnpl coding upstream 57927 10143028 ~ 10153094 (-)
LOC110503706 LOC105026808 coding upstream 67189 10152290 ~ 10159142 (-)
LOC110503317 LOC106612604 coding upstream 75793 10160894 ~ 10263430 (-)
G1901136 NA non-coding downstream 64 10084501 ~ 10084806 (-)
G1901134 NA non-coding downstream 1173 10083400 ~ 10083697 (-)
G1901131 NA non-coding downstream 3921 10080673 ~ 10080949 (-)
G1901129 NA non-coding downstream 5298 10079342 ~ 10079572 (-)
G1901128 NA non-coding downstream 5597 10078891 ~ 10079273 (-)
G1901138 NA non-coding upstream 891 10085992 ~ 10086250 (-)
G1901139 NA non-coding upstream 1515 10086616 ~ 10086822 (-)
G1901142 NA non-coding upstream 4121 10089222 ~ 10089436 (-)
G1901144 LOC106612610 non-coding upstream 5882 10090983 ~ 10091257 (-)
G1901146 NA non-coding upstream 7459 10092560 ~ 10092897 (-)
G1901072 LOC107388308 other downstream 72516 10005372 ~ 10012354 (-)
LOC110503680 LOC106612628 other downstream 510721 9570867 ~ 9579939 (-)
G1899875 NA other downstream 2036896 8046779 ~ 8047974 (-)
LOC110503590 LOC106612705 other downstream 3624805 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 3853062 6181377 ~ 6231808 (-)
G1901206 NA other upstream 120119 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 313941 10399042 ~ 10399857 (-)
G1901405 NA other upstream 531823 10616924 ~ 10617481 (-)
G1901516 NA other upstream 768730 10853831 ~ 10856437 (-)
LOC110503734 rnf7 other upstream 830453 10915471 ~ 10918092 (-)

Expression



Co-expression Network