Gene
RNA
| Item | Value |
|---|---|
| gene id | G1898680 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 10152023 ~ 10152724 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2171727 | True | 465 | lncRNA | 0.41 | 2 | 10152023 | 10152724 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503702 | LOC106612610 | coding | upstream | 54345 | 10079483 ~ 10097678 (+) |
| si:ch1073-228b5.2 | atp5sl | coding | upstream | 73328 | 10075372 ~ 10078695 (+) |
| LOC110503701 | LOC106612612 | coding | upstream | 90113 | 10028287 ~ 10061910 (+) |
| LOC110503697 | LOC106612613 | coding | upstream | 126266 | 10015851 ~ 10025757 (+) |
| LOC110503695 | LOC106612618 | coding | upstream | 194842 | 9948346 ~ 9957181 (+) |
| LOC118944010 | NA | coding | downstream | 5545 | 10158220 ~ 10160931 (+) |
| LOC118944011 | NA | coding | downstream | 52874 | 10205598 ~ 10228708 (+) |
| LOC110503709 | LOC106612599 | coding | downstream | 220409 | 10373133 ~ 10395848 (+) |
| LOC110503711 | LOC106580858 | coding | downstream | 243242 | 10395966 ~ 10402123 (+) |
| LOC110503712 | LOC106612598 | coding | downstream | 258027 | 10410751 ~ 10427770 (+) |
| G1898676 | LOC105006371 | non-coding | upstream | 3019 | 10145115 ~ 10149004 (+) |
| G1898710 | NA | non-coding | upstream | 22475 | 10129259 ~ 10129548 (+) |
| G1898709 | NA | non-coding | upstream | 24244 | 10127578 ~ 10127779 (+) |
| G1898683 | NA | non-coding | upstream | 46329 | 10104703 ~ 10105694 (+) |
| G1898684 | NA | non-coding | upstream | 51505 | 10099603 ~ 10100518 (+) |
| G1898675 | LOC106612604 | non-coding | downstream | 8223 | 10160947 ~ 10166520 (+) |
| G1898791 | NA | non-coding | downstream | 129024 | 10281748 ~ 10282184 (+) |
| G1898797 | NA | non-coding | downstream | 147047 | 10299771 ~ 10300091 (+) |
| G1898828 | NA | non-coding | downstream | 214306 | 10367030 ~ 10367540 (+) |
| G1898545 | LOC106612623 | other | upstream | 302684 | 9848472 ~ 9849339 (+) |
| G1898441 | NA | other | upstream | 562332 | 9588040 ~ 9589691 (+) |
| G1898293 | LOC106612633 | other | upstream | 626477 | 9519932 ~ 9525546 (+) |
| G1898315 | cep164 | other | upstream | 707966 | 9443294 ~ 9444057 (+) |
| G1898300 | NA | other | upstream | 792859 | 9357051 ~ 9359164 (+) |
| G1898772 | NA | other | downstream | 150458 | 10303182 ~ 10304418 (+) |
| G1898883 | NA | other | downstream | 335129 | 10487853 ~ 10488334 (+) |
| LOC110503716 | LOC106580865 | other | downstream | 391169 | 10543581 ~ 10560319 (+) |
| G1898930 | NA | other | downstream | 431391 | 10584115 ~ 10584449 (+) |
| LOC118944016 | LOC106931471 | other | downstream | 578272 | 10730732 ~ 10758090 (+) |
