G1901314


Basic Information

Item Value
gene id G1901314
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 10429647 ~ 10430068 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2174619
gcacaattggtggctgactaaatacttttttgccccattgtatatGGATTCAAGCCTACCAGCATGGATCGACTTTCTTTTCAGGTTTCAACCTTATACATGGCACACCAGTTCTGATTGGCTGTTGGTAATGTTATGAGACGTATCCTGCCATGGAGACATGGTTTATATCCCATCAGTGATGGGACCTGAGCCTCGTTTGTTGAGGTGACTTTGGTAATGATATTACTGTTACATCACAGGGACCTGCGTGTCCTTTTTGTTGGTTGATGATTTGCGATGATGGCAGAGTTGTAGCGTCGATATAGAAACCAGCAGACCGACCCTGTTCCCGCCTTGCACCTCTCCCCTATCTGCTTTGAATTATTGACCAGAATTTGGGGAGGGTTTGGGGTAGAAACCCCCAGGATGTACTTATTTGT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2174619 True 422 lncRNA 0.45 1 10429647 10430068

Neighbor

gene id symbol gene type direction distance location
if3c LOC106612601 coding downstream 59153 10367039 ~ 10370494 (-)
zgc:85932 LOC106612602 coding downstream 66411 10352600 ~ 10363236 (-)
LOC110503707 LOC106612603 coding downstream 77880 10303042 ~ 10351767 (-)
LOC118944110 NA coding downstream 127992 10287108 ~ 10301655 (-)
LOC110503317 LOC106612604 coding downstream 166217 10160894 ~ 10263430 (-)
zgc:152863 LOC106612597 coding upstream 1211 10431279 ~ 10437484 (-)
LOC110503714 LOC106612596 coding upstream 9200 10438594 ~ 10466799 (-)
LOC110503715 LOC106612595 coding upstream 47887 10477955 ~ 10495064 (-)
LOC110503717 LOC106612594 coding upstream 92940 10523008 ~ 10545646 (-)
LOC110503721 LOC106612590 coding upstream 166507 10596575 ~ 10605378 (-)
G1901306 LOC106612598 non-coding downstream 14228 10410635 ~ 10415419 (-)
G1901295 NA non-coding downstream 32745 10394778 ~ 10396902 (-)
G1901291 NA non-coding downstream 62750 10366340 ~ 10366897 (-)
G1901337 NA non-coding upstream 58551 10488619 ~ 10563143 (-)
G1901380 NA non-coding upstream 134755 10564823 ~ 10565051 (-)
G1901170 NA non-coding upstream 154096 10584164 ~ 10584529 (-)
G1901302 LOC106612600 other downstream 29790 10399042 ~ 10399857 (-)
G1901206 NA other downstream 223699 10205220 ~ 10205948 (-)
G1901072 LOC107388308 other downstream 417293 10005372 ~ 10012354 (-)
LOC110503680 LOC106612628 other downstream 855498 9570867 ~ 9579939 (-)
G1899875 NA other downstream 2381673 8046779 ~ 8047974 (-)
G1901405 NA other upstream 186856 10616924 ~ 10617481 (-)
G1901516 NA other upstream 423763 10853831 ~ 10856437 (-)
LOC110503734 rnf7 other upstream 485486 10915471 ~ 10918092 (-)
G1901922 LOC100380637 other upstream 760607 11190675 ~ 11192759 (-)
LOC110503748 LOC106612568 other upstream 1023336 11453367 ~ 11478299 (-)

Expression


Co-expression Network