G1901492


Basic Information

Item Value
gene id G1901492
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 10811416 ~ 10812071 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2174814
TACTGtatacatataactaggaataaagtgacagaatAGTAAactgtagcagcagtgtatatgaTGAGTCaaaaagttagtgcaaaaagggtcaatgcagacagTCCAGGGAGCTATTTggtttaactaactatttagcagttttatggcttgggggtagaagctgttcagggtcctgttggttccagacttgatgcataagtaccgcttgccatgcggtagcagagagaacactaggacttgggtggctggagtctttgaccatttttagggccttcctctgacaccgcctggtatagaggtcctgaatggcatagagcttggccctagtgatgtactgggccgtacgcacaacACTCTGTAGCGTcttgcagtcggatgccaagcagttgccatacgaaGCGGTAATGcatccagtcaagatgctctcagcgGTGCAGgtgtagaactttttgaagatctgagggccAATGCATTTAGCTCCTCTGGCTGGCTGGTttatctgtgatagtttgcaagccctgccacatccaatgagCTTCAGAGCCGGTgaagtaggattcgatcttagtcctttattgaacctttgcctgtttgatagtttGTTGGAGGGCGTAGCTatatttcttataagcatccgggttagtgtcccgctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2174814 True 656 lncRNA 0.47 1 10811416 10812071

Neighbor

gene id symbol gene type direction distance location
LOC110503728 LOC106612577 coding downstream 2012 10765892 ~ 10809404 (-)
LOC110503726 LOC106612578 coding downstream 81005 10726288 ~ 10730411 (-)
LOC110503727 LOC106612579 coding downstream 91305 10711334 ~ 10720111 (-)
LOC110503722 LOC106612588 coding downstream 109892 10636698 ~ 10701524 (-)
LOC110503721 LOC106612590 coding downstream 206038 10596575 ~ 10605378 (-)
LOC110503731 LOC106612580 coding upstream 61709 10873780 ~ 10877199 (-)
LOC110503733 LOC106612581 coding upstream 93258 10905329 ~ 10912872 (-)
LOC110503734 rnf7 coding upstream 103400 10915471 ~ 10918092 (-)
shbgb shbgb coding upstream 160020 10972091 ~ 10982118 (-)
LOC110503738 rasa2 coding upstream 174339 10983924 ~ 11027881 (-)
G1901448 NA non-coding downstream 90191 10720899 ~ 10721225 (-)
G1901392 NA non-coding downstream 218447 10592086 ~ 10592969 (-)
G1901388 NA non-coding downstream 223845 10587103 ~ 10587571 (-)
G1901170 NA non-coding downstream 226887 10584164 ~ 10584529 (-)
G1901380 NA non-coding downstream 246365 10564823 ~ 10565051 (-)
G1901501 NA non-coding upstream 8942 10821013 ~ 10821392 (-)
G1901532 LOC106612575 non-coding upstream 40527 10852598 ~ 10853532 (-)
G1901752 NA non-coding upstream 58906 10870977 ~ 10871522 (-)
G1901763 NA non-coding upstream 79577 10891648 ~ 10891902 (-)
G1901405 NA other downstream 193935 10616924 ~ 10617481 (-)
G1901302 LOC106612600 other downstream 411559 10399042 ~ 10399857 (-)
G1901206 NA other downstream 605468 10205220 ~ 10205948 (-)
G1901072 LOC107388308 other downstream 799062 10005372 ~ 10012354 (-)
LOC110503680 LOC106612628 other downstream 1237267 9570867 ~ 9579939 (-)
G1901516 NA other upstream 41760 10853831 ~ 10856437 (-)
G1901922 LOC100380637 other upstream 378604 11190675 ~ 11192759 (-)
LOC110503748 LOC106612568 other upstream 641333 11453367 ~ 11478299 (-)
G1902875 NA other upstream 1155771 11967842 ~ 12052648 (-)

Expression


Co-expression Network