G1903481


Basic Information

Item Value
gene id G1903481
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 12637922 ~ 12703131 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2177064
TCACTGTCAATACAGTGGTCTTGCCTTCACACTCACTTCAAGCACAACGGAAAAACCTGTGCTAAAATGATTCTGTGAGCGTAACTTCTCGATTTTATTTagataatatatttattttaattctATACATAGGCCTAAAACACAGATTAAGCGTTGCGTTCCATGAAAGGGGCTGATAGTAGCATATTCCGTGAAAGTAGGCAAGTAAAGTTAGGCTACAGGTAAAGCTGGCAAACAGCGGCCTCGTAAGAGAAACCAAAGGACTCCACAAATCCCGCAAAAATGAGGTGAAAATTGAAGATTTCGCTTGAGAAATACGTCCGATTATAAAAgaAGAACGTAAAAGAGAACCATGATCAGAAGAAAAAGGAATGATGAACTTACCAGACATGTTGTAAAATgacctgagccctaggaccattcctcaggattacctggcatgatgactccttgctgtccccagtccacctggccatgctgctgctccagttaactgttctgcctgcggctatggaatcctgacctgttcaccggacgtgctacctttcccagacctgctgttttcaactctctagagatagCAGGAGCGGTAgggatactcttaatgatcggctatgaaaagccaactgacatttactcctaaggtgctgacttgctgcaccctcaacaactactgtgattattattatttgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccacccctcatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagacaccgtgcttctacacctgcatttcttgaattttggggttttaggctgggtttctgtacagca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2177064 True 911 lncRNA 0.44 3 12637922 12703131

Neighbor

gene id symbol gene type direction distance location
LOC110503769 LOC106612539 coding downstream 41230 12570052 ~ 12596692 (-)
il4i1 LOC106612549 coding downstream 209934 12423276 ~ 12427988 (-)
LOC110503765 LOC106612556 coding downstream 217941 12405983 ~ 12419981 (-)
LOC110503763 LOC106612548 coding downstream 251858 12378904 ~ 12386064 (-)
LOC110503325 sorl1 coding downstream 266531 12298441 ~ 12371391 (-)
LOC110503775 pou2af1 coding upstream 13154 12716285 ~ 12724009 (-)
LOC110503777 atf5 coding upstream 67726 12770857 ~ 12775243 (-)
LOC110503783 NA coding upstream 84176 12787307 ~ 12796055 (-)
LOC118944087 LOC106612531 coding upstream 178643 12881774 ~ 12898729 (-)
LOC110503778 NA coding upstream 249553 12952684 ~ 13036439 (-)
G1903452 NA non-coding downstream 27461 12610169 ~ 12610461 (-)
G1903223 NA non-coding downstream 72026 12565639 ~ 12565896 (-)
G1903212 NA non-coding downstream 79720 12557991 ~ 12558202 (-)
G1903199 NA non-coding downstream 90918 12541099 ~ 12547004 (-)
G1903479 LOC106612553 non-coding upstream 879 12704010 ~ 12708491 (-)
G1903523 NA non-coding upstream 6246 12709377 ~ 12709598 (-)
G1903574 LOC106612534 non-coding upstream 114058 12817189 ~ 12831695 (-)
G1903595 NA non-coding upstream 158500 12861631 ~ 12933686 (-)
G1903598 NA non-coding upstream 164582 12867713 ~ 12939238 (-)
G1902875 NA other downstream 585274 11967842 ~ 12052648 (-)
LOC110503324 LOC106612555 other downstream 657460 11941794 ~ 11982431 (-)
LOC110503748 LOC106612568 other downstream 1176875 11453367 ~ 11478299 (-)
G1901922 LOC100380637 other downstream 1445163 11190675 ~ 11192759 (-)
LOC110503734 rnf7 other downstream 1719830 10915471 ~ 10918092 (-)
rabx5 rabx5 other upstream 1013519 13716650 ~ 13719451 (-)
G1904408 NA other upstream 1054697 13757828 ~ 13758644 (-)
G1904846 spg20 other upstream 1339839 14042970 ~ 14043449 (-)
G1904877 NA other upstream 1386591 14089722 ~ 14142728 (-)

Expression


Co-expression Network