Gene
RNA
| Item | Value |
|---|---|
| gene id | G1903523 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 12709377 ~ 12709598 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2177117 | True | 222 | lncRNA | 0.41 | 1 | 12709377 | 12709598 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503769 | LOC106612539 | coding | downstream | 112685 | 12570052 ~ 12596692 (-) |
| il4i1 | LOC106612549 | coding | downstream | 281389 | 12423276 ~ 12427988 (-) |
| LOC110503765 | LOC106612556 | coding | downstream | 289396 | 12405983 ~ 12419981 (-) |
| LOC110503763 | LOC106612548 | coding | downstream | 323313 | 12378904 ~ 12386064 (-) |
| LOC110503325 | sorl1 | coding | downstream | 337986 | 12298441 ~ 12371391 (-) |
| LOC110503775 | pou2af1 | coding | upstream | 6687 | 12716285 ~ 12724009 (-) |
| LOC110503777 | atf5 | coding | upstream | 61259 | 12770857 ~ 12775243 (-) |
| LOC110503783 | NA | coding | upstream | 77709 | 12787307 ~ 12796055 (-) |
| LOC118944087 | LOC106612531 | coding | upstream | 172176 | 12881774 ~ 12898729 (-) |
| LOC110503778 | NA | coding | upstream | 243086 | 12952684 ~ 13036439 (-) |
| G1903479 | LOC106612553 | non-coding | downstream | 886 | 12704010 ~ 12708491 (-) |
| G1903481 | NA | non-coding | downstream | 6246 | 12637922 ~ 12703131 (-) |
| G1903452 | NA | non-coding | downstream | 98916 | 12610169 ~ 12610461 (-) |
| G1903223 | NA | non-coding | downstream | 143481 | 12565639 ~ 12565896 (-) |
| G1903574 | LOC106612534 | non-coding | upstream | 107591 | 12817189 ~ 12831695 (-) |
| G1903595 | NA | non-coding | upstream | 152033 | 12861631 ~ 12933686 (-) |
| G1903598 | NA | non-coding | upstream | 158115 | 12867713 ~ 12939238 (-) |
| G1903640 | NA | non-coding | upstream | 312828 | 13022426 ~ 13070359 (-) |
| G1903604 | mfsd1 | non-coding | upstream | 347505 | 13057103 ~ 13068432 (-) |
| G1902875 | NA | other | downstream | 656729 | 11967842 ~ 12052648 (-) |
| LOC110503324 | LOC106612555 | other | downstream | 728915 | 11941794 ~ 11982431 (-) |
| LOC110503748 | LOC106612568 | other | downstream | 1248330 | 11453367 ~ 11478299 (-) |
| G1901922 | LOC100380637 | other | downstream | 1516618 | 11190675 ~ 11192759 (-) |
| LOC110503734 | rnf7 | other | downstream | 1791285 | 10915471 ~ 10918092 (-) |
| rabx5 | rabx5 | other | upstream | 1007052 | 13716650 ~ 13719451 (-) |
| G1904408 | NA | other | upstream | 1048230 | 13757828 ~ 13758644 (-) |
| G1904846 | spg20 | other | upstream | 1333372 | 14042970 ~ 14043449 (-) |
| G1904877 | NA | other | upstream | 1380124 | 14089722 ~ 14142728 (-) |
