Gene
RNA
| Item | Value |
|---|---|
| gene id | G1903598 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 12867713 ~ 12939238 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| alpha-2-macroglobulin-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2177199 | True | 323 | lncRNA | 0.48 | 2 | 12867713 | 12939238 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503783 | NA | coding | downstream | 71658 | 12787307 ~ 12796055 (-) |
| LOC110503777 | atf5 | coding | downstream | 92470 | 12770857 ~ 12775243 (-) |
| LOC110503775 | pou2af1 | coding | downstream | 143704 | 12716285 ~ 12724009 (-) |
| LOC110503769 | LOC106612539 | coding | downstream | 271021 | 12570052 ~ 12596692 (-) |
| il4i1 | LOC106612549 | coding | downstream | 439725 | 12423276 ~ 12427988 (-) |
| LOC110503778 | NA | coding | upstream | 13446 | 12952684 ~ 13036439 (-) |
| LOC110503787 | LOC106612780 | coding | upstream | 485490 | 13424549 ~ 13437553 (-) |
| LOC110503790 | LOC107702995 | coding | upstream | 536243 | 13475481 ~ 13546234 (-) |
| LOC110503789 | NA | coding | upstream | 607099 | 13546337 ~ 13555170 (-) |
| LOC110503327 | LOC106580965 | coding | upstream | 650629 | 13589867 ~ 13593563 (-) |
| G1903574 | LOC106612534 | non-coding | downstream | 36018 | 12817189 ~ 12831695 (-) |
| G1903523 | NA | non-coding | downstream | 158115 | 12709377 ~ 12709598 (-) |
| G1903479 | LOC106612553 | non-coding | downstream | 159222 | 12704010 ~ 12708491 (-) |
| G1903481 | NA | non-coding | downstream | 164582 | 12637922 ~ 12703131 (-) |
| G1903452 | NA | non-coding | downstream | 257252 | 12610169 ~ 12610461 (-) |
| G1903640 | NA | non-coding | upstream | 83188 | 13022426 ~ 13070359 (-) |
| G1903604 | mfsd1 | non-coding | upstream | 117865 | 13057103 ~ 13068432 (-) |
| G1903653 | NA | non-coding | upstream | 131359 | 13070597 ~ 13070898 (-) |
| G1904093 | NA | non-coding | upstream | 171177 | 13110415 ~ 13110731 (-) |
| G1904102 | NA | non-coding | upstream | 195007 | 13134245 ~ 13134915 (-) |
| G1902875 | NA | other | downstream | 815065 | 11967842 ~ 12052648 (-) |
| LOC110503324 | LOC106612555 | other | downstream | 887251 | 11941794 ~ 11982431 (-) |
| LOC110503748 | LOC106612568 | other | downstream | 1406666 | 11453367 ~ 11478299 (-) |
| G1901922 | LOC100380637 | other | downstream | 1674954 | 11190675 ~ 11192759 (-) |
| rabx5 | rabx5 | other | upstream | 777412 | 13716650 ~ 13719451 (-) |
| G1904408 | NA | other | upstream | 818590 | 13757828 ~ 13758644 (-) |
| G1904846 | spg20 | other | upstream | 1103732 | 14042970 ~ 14043449 (-) |
| G1904877 | NA | other | upstream | 1150484 | 14089722 ~ 14142728 (-) |
| G1904919 | NA | other | upstream | 1240825 | 14180063 ~ 14214520 (-) |
