G1904102


Basic Information

Item Value
gene id G1904102
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 13134245 ~ 13134915 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2177795
gagctcctgtatatattgagatttaaatggttttttagagtgaagtacatcgaaaaaatcaaaagaaaactgcaagactcaatagaagacaatacaagcaacaaaccaaaaagacaggatttcgaaaaagtaactatttttcataaaattatacagttatcttagctagctgaattgttagctgaattgtttacatgttgctaagcagttgctagggactctcctggaagaagctagctagcttacaaagaataacaaaaaaaatatctagttaacagaagaaaggaagacaaaataaggacagaagaaaaaagaaaagaaaaaaggacaacaaagtgaaacagtcctctgaagaaacaagagagcattatacaagaaacttctattgcaacattgtagccaacatcaccagcgttgctatggaaattgtttacccaccagacatccaaacagagaaagctaagaaaagtttcaaaggtttgttgatgggacagaaccatgaatgcctgtttgcagatcttaccagttacaaaacaagagcaaatttaatttttaataccaatcgagggaacatatggaaaaaggttatttgcaaccatttccctttctcaaaaaagaggggcatcagccaaggatgtcagatcagcatttttgaagaagctgaccagagc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106600263, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2177795 True 671 lncRNA 0.35 1 13134245 13134915

Neighbor

gene id symbol gene type direction distance location
LOC110503778 NA coding downstream 97806 12952684 ~ 13036439 (-)
LOC118944087 LOC106612531 coding downstream 235516 12881774 ~ 12898729 (-)
LOC110503783 NA coding downstream 338190 12787307 ~ 12796055 (-)
LOC110503777 atf5 coding downstream 359002 12770857 ~ 12775243 (-)
LOC110503775 pou2af1 coding downstream 410236 12716285 ~ 12724009 (-)
LOC110503787 LOC106612780 coding upstream 289813 13424549 ~ 13437553 (-)
LOC110503790 LOC107702995 coding upstream 340566 13475481 ~ 13546234 (-)
LOC110503789 NA coding upstream 411422 13546337 ~ 13555170 (-)
LOC110503327 LOC106580965 coding upstream 454952 13589867 ~ 13593563 (-)
kpna4 kpna4 coding upstream 459027 13593942 ~ 13607211 (-)
G1904093 NA non-coding downstream 23514 13110415 ~ 13110731 (-)
G1903653 NA non-coding downstream 63347 13070597 ~ 13070898 (-)
G1903640 NA non-coding downstream 63886 13022426 ~ 13070359 (-)
G1903604 mfsd1 non-coding downstream 65813 13057103 ~ 13068432 (-)
G1903598 NA non-coding downstream 195007 12867713 ~ 12939238 (-)
G1904104 NA non-coding upstream 5864 13140779 ~ 13195201 (-)
G1904125 NA non-coding upstream 108549 13243464 ~ 13248143 (-)
G1904157 NA non-coding upstream 120892 13255807 ~ 13256025 (-)
G1904170 NA non-coding upstream 146583 13281498 ~ 13281767 (-)
G1904172 NA non-coding upstream 149023 13283938 ~ 13284243 (-)
G1902875 NA other downstream 1081597 11967842 ~ 12052648 (-)
LOC110503324 LOC106612555 other downstream 1153783 11941794 ~ 11982431 (-)
LOC110503748 LOC106612568 other downstream 1673198 11453367 ~ 11478299 (-)
G1901922 LOC100380637 other downstream 1941486 11190675 ~ 11192759 (-)
rabx5 rabx5 other upstream 581735 13716650 ~ 13719451 (-)
G1904408 NA other upstream 622913 13757828 ~ 13758644 (-)
G1904846 spg20 other upstream 908055 14042970 ~ 14043449 (-)
G1904877 NA other upstream 954807 14089722 ~ 14142728 (-)
G1904919 NA other upstream 1045148 14180063 ~ 14214520 (-)

Expression


Co-expression Network