Gene
RNA
| Item | Value |
|---|---|
| gene id | G1904384 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 13696982 ~ 13697375 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2178106 | True | 394 | lncRNA | 0.45 | 1 | 13696982 | 13697375 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503795 | ppm1l | coding | downstream | 30507 | 13613805 ~ 13666475 (-) |
| kpna4 | kpna4 | coding | downstream | 89771 | 13593942 ~ 13607211 (-) |
| LOC110503327 | LOC106580965 | coding | downstream | 106193 | 13589867 ~ 13593563 (-) |
| LOC110503789 | NA | coding | downstream | 141812 | 13546337 ~ 13555170 (-) |
| LOC110503790 | LOC107702995 | coding | downstream | 150748 | 13475481 ~ 13546234 (-) |
| LOC110503800 | LOC106612904 | coding | upstream | 4987 | 13702362 ~ 13707142 (-) |
| rabx5 | rabx5 | coding | upstream | 20592 | 13716650 ~ 13719451 (-) |
| LOC110503330 | LOC106612760 | coding | upstream | 114277 | 13811652 ~ 13812593 (-) |
| LOC110503333 | LOC106612769 | coding | upstream | 190144 | 13887519 ~ 13888439 (-) |
| LOC110503334 | LOC106612769 | coding | upstream | 197910 | 13895285 ~ 13896205 (-) |
| G1904383 | NA | non-coding | downstream | 4782 | 13691955 ~ 13692200 (-) |
| G1904379 | NA | non-coding | downstream | 12003 | 13684690 ~ 13684979 (-) |
| G1904377 | NA | non-coding | downstream | 14551 | 13682195 ~ 13682431 (-) |
| G1904260 | LOC106580968 | non-coding | downstream | 138584 | 13555267 ~ 13558398 (-) |
| G1904386 | otol1 | non-coding | upstream | 1706 | 13699081 ~ 13700576 (-) |
| G1904389 | NA | non-coding | upstream | 29032 | 13726407 ~ 13726650 (-) |
| G1904391 | NA | non-coding | upstream | 30410 | 13727785 ~ 13728062 (-) |
| G1904393 | NA | non-coding | upstream | 32653 | 13730028 ~ 13730265 (-) |
| G1904396 | NA | non-coding | upstream | 37384 | 13734759 ~ 13740554 (-) |
| LOC110503775 | pou2af1 | other | downstream | 972985 | 12716285 ~ 12724009 (-) |
| G1902875 | NA | other | downstream | 1644334 | 11967842 ~ 12052648 (-) |
| LOC110503324 | LOC106612555 | other | downstream | 1716520 | 11941794 ~ 11982431 (-) |
| LOC110503748 | LOC106612568 | other | downstream | 2235935 | 11453367 ~ 11478299 (-) |
| G1901922 | LOC100380637 | other | downstream | 2504223 | 11190675 ~ 11192759 (-) |
| G1904408 | NA | other | upstream | 60453 | 13757828 ~ 13758644 (-) |
| G1904846 | spg20 | other | upstream | 345595 | 14042970 ~ 14043449 (-) |
| G1904877 | NA | other | upstream | 392347 | 14089722 ~ 14142728 (-) |
| G1904919 | NA | other | upstream | 482688 | 14180063 ~ 14214520 (-) |
