Gene
RNA
| Item | Value |
|---|---|
| gene id | G1904398 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 13741198 ~ 13741519 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2178123 | True | 322 | lncRNA | 0.48 | 1 | 13741198 | 13741519 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rabx5 | rabx5 | coding | downstream | 21751 | 13716650 ~ 13719451 (-) |
| LOC110503800 | LOC106612904 | coding | downstream | 34056 | 13702362 ~ 13707142 (-) |
| LOC110503795 | ppm1l | coding | downstream | 74723 | 13613805 ~ 13666475 (-) |
| kpna4 | kpna4 | coding | downstream | 133987 | 13593942 ~ 13607211 (-) |
| LOC110503327 | LOC106580965 | coding | downstream | 150409 | 13589867 ~ 13593563 (-) |
| LOC110503330 | LOC106612760 | coding | upstream | 70133 | 13811652 ~ 13812593 (-) |
| LOC110503333 | LOC106612769 | coding | upstream | 146000 | 13887519 ~ 13888439 (-) |
| LOC110503334 | LOC106612769 | coding | upstream | 153766 | 13895285 ~ 13896205 (-) |
| LOC118943997 | LOC106612769 | coding | upstream | 161520 | 13903039 ~ 13903959 (-) |
| LOC110503335 | LOC106612769 | coding | upstream | 171838 | 13913357 ~ 13914277 (-) |
| G1904396 | NA | non-coding | downstream | 644 | 13734759 ~ 13740554 (-) |
| G1904393 | NA | non-coding | downstream | 10933 | 13730028 ~ 13730265 (-) |
| G1904391 | NA | non-coding | downstream | 13136 | 13727785 ~ 13728062 (-) |
| G1904389 | NA | non-coding | downstream | 14548 | 13726407 ~ 13726650 (-) |
| G1904386 | otol1 | non-coding | downstream | 40622 | 13699081 ~ 13700576 (-) |
| G1904423 | NA | non-coding | upstream | 39822 | 13781341 ~ 13786197 (-) |
| G1904486 | NA | non-coding | upstream | 130074 | 13871593 ~ 13872018 (-) |
| G1904829 | ints4 | non-coding | upstream | 270639 | 14012158 ~ 14012456 (-) |
| G1904836 | NA | non-coding | upstream | 287252 | 14028771 ~ 14029064 (-) |
| G1904838 | NA | non-coding | upstream | 289449 | 14030968 ~ 14031172 (-) |
| LOC110503775 | pou2af1 | other | downstream | 1017201 | 12716285 ~ 12724009 (-) |
| G1902875 | NA | other | downstream | 1688550 | 11967842 ~ 12052648 (-) |
| LOC110503324 | LOC106612555 | other | downstream | 1760736 | 11941794 ~ 11982431 (-) |
| LOC110503748 | LOC106612568 | other | downstream | 2280151 | 11453367 ~ 11478299 (-) |
| G1904408 | NA | other | upstream | 16309 | 13757828 ~ 13758644 (-) |
| G1904846 | spg20 | other | upstream | 301451 | 14042970 ~ 14043449 (-) |
| G1904877 | NA | other | upstream | 348203 | 14089722 ~ 14142728 (-) |
| G1904919 | NA | other | upstream | 438544 | 14180063 ~ 14214520 (-) |
| G1905348 | NA | other | upstream | 878144 | 14619663 ~ 14621372 (-) |
