G1904838



Basic Information


Item Value
gene id G1904838
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 14030968 ~ 14031172 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2178608
aactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaggaatcaacaacaagtgggacacaatcatgaagtggaacaacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtacaaaattattcagcccctttactttcagtgcagcaaactc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2178608 True 205 lncRNA 0.33 1 14030968 14031172

Neighbor


gene id symbol gene type direction distance location
LOC110503806 LOC106612897 coding downstream 4921 14021980 ~ 14026047 (-)
aamdc aamdc coding downstream 11754 14015443 ~ 14019214 (-)
LOC118944122 NA coding downstream 31291 13999529 ~ 13999677 (-)
LOC118944120 NA coding downstream 32028 13998794 ~ 13998940 (-)
LOC118944121 NA coding downstream 32773 13998047 ~ 13998195 (-)
LOC110503343 LOC106612894 coding upstream 40614 14071786 ~ 14401799 (-)
LOC110503811 stard13 coding upstream 373589 14404761 ~ 14519627 (-)
LOC110503815 dus14 coding upstream 516545 14547717 ~ 14549440 (-)
LOC110503814 LOC106612890 coding upstream 535844 14567016 ~ 14585375 (-)
kbtbd3 kbtbd3 coding upstream 555768 14586940 ~ 14591929 (-)
G1904836 NA non-coding downstream 1904 14028771 ~ 14029064 (-)
G1904829 ints4 non-coding downstream 18512 14012158 ~ 14012456 (-)
G1904486 NA non-coding downstream 158950 13871593 ~ 13872018 (-)
G1904423 NA non-coding downstream 244771 13781341 ~ 13786197 (-)
G1904398 NA non-coding downstream 289449 13741198 ~ 13741519 (-)
G1904841 NA non-coding upstream 1986 14033158 ~ 14033476 (-)
G1904852 NA non-coding upstream 17271 14048443 ~ 14048751 (-)
G1904874 NA non-coding upstream 47481 14078653 ~ 14078913 (-)
G1904875 NA non-coding upstream 51612 14082784 ~ 14083023 (-)
G1904408 NA other downstream 272324 13757828 ~ 13758644 (-)
rabx5 rabx5 other downstream 311517 13716650 ~ 13719451 (-)
LOC110503775 pou2af1 other downstream 1306971 12716285 ~ 12724009 (-)
G1902875 NA other downstream 1978320 11967842 ~ 12052648 (-)
G1904846 spg20 other upstream 11798 14042970 ~ 14043449 (-)
G1904877 NA other upstream 58550 14089722 ~ 14142728 (-)
G1904919 NA other upstream 148891 14180063 ~ 14214520 (-)
G1905348 NA other upstream 588491 14619663 ~ 14621372 (-)
G1905324 LOC106612883 other upstream 591023 14622195 ~ 14655274 (-)

Expression



Co-expression Network