G1907940


Basic Information

Item Value
gene id G1907940
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 16115049 ~ 16115427 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2182081
ccttgcttgcaaattcggcctgctaactgctagcttgtttagcccggtccgctaactgctaccgtgtttagcaccgtctactaactgttagcttgttagcacaggcctgctaaccatctgaatcgccgcgtcccaaacactcactgaacccatatttactttctatcccttttcgatttttttatttgtttataccttccggtaacctgcctcacccaatgtgatacggaaccgctattatctttacacttttagaacacactcaagaaccttcagaagctaaccagctaactggctacaagctatttagtcattgttagttttctaacctggataacactcgccagtccagcttccctgccccatccaccgctgcccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2182081 True 379 lncRNA 0.46 1 16115049 16115427

Neighbor

gene id symbol gene type direction distance location
LOC110503846 NA coding downstream 70309 16036987 ~ 16044740 (-)
LOC110503843 bcas3 coding downstream 86375 15678320 ~ 16028674 (-)
LOC110503841 LOC106612865 coding downstream 450768 15654551 ~ 15664281 (-)
LOC110503840 LOC106612866 coding downstream 483562 15599083 ~ 15631487 (-)
LOC110503839 LOC106612868 coding downstream 671877 15415537 ~ 15443172 (-)
slc46a1 slc46a1 coding upstream 17737 16133164 ~ 16138513 (-)
LOC110503852 LOC106612852 coding upstream 82619 16198046 ~ 16224497 (-)
LOC110503854 LOC106612853 coding upstream 112144 16227571 ~ 16234629 (-)
LOC110503859 LOC106612846 coding upstream 277849 16393276 ~ 16407374 (-)
aipl1 LOC106612843 coding upstream 298258 16413685 ~ 16422281 (-)
G1907939 NA non-coding downstream 2288 16112406 ~ 16112761 (-)
G1907934 NA non-coding downstream 10182 16104503 ~ 16104867 (-)
G1907856 NA non-coding downstream 78190 15969611 ~ 16036859 (-)
G1907817 NA non-coding downstream 166511 15948139 ~ 15948538 (-)
G1907815 NA non-coding downstream 173132 15889514 ~ 15941917 (-)
G1907914 NA non-coding upstream 15385 16130812 ~ 16131247 (-)
G1907962 NA non-coding upstream 69608 16185035 ~ 16185488 (-)
G1908004 LOC106612850 non-coding upstream 147147 16262574 ~ 16264753 (-)
G1908067 NA non-coding upstream 212282 16327709 ~ 16328139 (-)
G1908029 NA non-coding upstream 345993 16461420 ~ 16476960 (-)
G1906218 NA other downstream 601956 15512359 ~ 15513093 (-)
G1906198 NA other downstream 614289 15500204 ~ 15500760 (-)
G1906115 NA other downstream 760476 15353940 ~ 15354573 (-)
LOC110503349 LOC106612868 other downstream 857852 15252457 ~ 15298489 (-)
G1907922 NA other upstream 16563 16131990 ~ 16132562 (-)
G1907951 NA other upstream 43419 16158846 ~ 16161226 (-)
LOC118944080 LOC106612823 other upstream 1162380 17277554 ~ 17278524 (-)
LOC110503924 LOC107554284 other upstream 2316597 18432024 ~ 18434798 (-)
LOC110503944 LOC106612932 other upstream 2852635 18968062 ~ 19185772 (-)

Expression


Co-expression Network