Gene
RNA
| Item | Value |
|---|---|
| gene id | G1907914 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 16130812 ~ 16131247 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2182054 | False | 436 | lncRNA | 0.37 | 1 | 16130812 | 16131247 |
| TU2182053 | True | 277 | lncRNA | 0.39 | 1 | 16130971 | 16131247 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503846 | NA | coding | downstream | 86072 | 16036987 ~ 16044740 (-) |
| LOC110503843 | bcas3 | coding | downstream | 102138 | 15678320 ~ 16028674 (-) |
| LOC110503841 | LOC106612865 | coding | downstream | 466531 | 15654551 ~ 15664281 (-) |
| LOC110503840 | LOC106612866 | coding | downstream | 499325 | 15599083 ~ 15631487 (-) |
| LOC110503839 | LOC106612868 | coding | downstream | 687640 | 15415537 ~ 15443172 (-) |
| slc46a1 | slc46a1 | coding | upstream | 1917 | 16133164 ~ 16138513 (-) |
| LOC110503852 | LOC106612852 | coding | upstream | 66799 | 16198046 ~ 16224497 (-) |
| LOC110503854 | LOC106612853 | coding | upstream | 96324 | 16227571 ~ 16234629 (-) |
| LOC110503859 | LOC106612846 | coding | upstream | 262029 | 16393276 ~ 16407374 (-) |
| aipl1 | LOC106612843 | coding | upstream | 282438 | 16413685 ~ 16422281 (-) |
| G1907940 | NA | non-coding | downstream | 15385 | 16115049 ~ 16115427 (-) |
| G1907939 | NA | non-coding | downstream | 18051 | 16112406 ~ 16112761 (-) |
| G1907934 | NA | non-coding | downstream | 25945 | 16104503 ~ 16104867 (-) |
| G1907856 | NA | non-coding | downstream | 93953 | 15969611 ~ 16036859 (-) |
| G1907817 | NA | non-coding | downstream | 182274 | 15948139 ~ 15948538 (-) |
| G1907962 | NA | non-coding | upstream | 53788 | 16185035 ~ 16185488 (-) |
| G1908004 | LOC106612850 | non-coding | upstream | 131327 | 16262574 ~ 16264753 (-) |
| G1908067 | NA | non-coding | upstream | 196462 | 16327709 ~ 16328139 (-) |
| G1908029 | NA | non-coding | upstream | 330173 | 16461420 ~ 16476960 (-) |
| G1908202 | LOC106612839 | non-coding | upstream | 486725 | 16617972 ~ 16622138 (-) |
| G1906218 | NA | other | downstream | 617719 | 15512359 ~ 15513093 (-) |
| G1906198 | NA | other | downstream | 630052 | 15500204 ~ 15500760 (-) |
| G1906115 | NA | other | downstream | 776239 | 15353940 ~ 15354573 (-) |
| LOC110503349 | LOC106612868 | other | downstream | 873615 | 15252457 ~ 15298489 (-) |
| G1907922 | NA | other | upstream | 743 | 16131990 ~ 16132562 (-) |
| G1907951 | NA | other | upstream | 27599 | 16158846 ~ 16161226 (-) |
| LOC118944080 | LOC106612823 | other | upstream | 1146560 | 17277554 ~ 17278524 (-) |
| LOC110503924 | LOC107554284 | other | upstream | 2300777 | 18432024 ~ 18434798 (-) |
| LOC110503944 | LOC106612932 | other | upstream | 2836815 | 18968062 ~ 19185772 (-) |
