G1908067


Basic Information

Item Value
gene id G1908067
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 16327709 ~ 16328139 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2182213
gggtaggtaacaacacatctgccacgctgatcctcaacacgtgggccccttaggggtgcatgctcagtcccctcctgtactccctgttcaaccatgactgcatggccagacacgactccaatcaggagactgaaaagatttggcatgggtcttcagatcctcaaaaggttctacagcatcCTAATTAGTTGCATCcctgcctggtatagcaactgctcggcctccgaccgcaaagcactacagagggtagtgcatatagCCCAGTACAACACTTGGccccaagcttcttgccatccaggacctctataccaggcagtgtcagaggaaggccctaaaaattgtcaaagactccagtcaccctagtcataggccgttctctctgctaccgcatggtatgctgtaccggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2182213 True 408 lncRNA 0.53 2 16327709 16328139

Neighbor

gene id symbol gene type direction distance location
LOC110503854 LOC106612853 coding downstream 93080 16227571 ~ 16234629 (-)
LOC110503852 LOC106612852 coding downstream 103212 16198046 ~ 16224497 (-)
slc46a1 slc46a1 coding downstream 189196 16133164 ~ 16138513 (-)
LOC110503846 NA coding downstream 282969 16036987 ~ 16044740 (-)
LOC110503843 bcas3 coding downstream 299035 15678320 ~ 16028674 (-)
LOC110503859 LOC106612846 coding upstream 65137 16393276 ~ 16407374 (-)
aipl1 LOC106612843 coding upstream 85546 16413685 ~ 16422281 (-)
abhd15a LOC106612842 coding upstream 177873 16506012 ~ 16515306 (-)
LOC110503865 rflnb coding upstream 227623 16555762 ~ 16558682 (-)
LOC110503864 vps53 coding upstream 231621 16559760 ~ 16591432 (-)
G1908004 LOC106612850 non-coding downstream 62956 16262574 ~ 16264753 (-)
G1907962 NA non-coding downstream 142221 16185035 ~ 16185488 (-)
G1907914 NA non-coding downstream 196462 16130812 ~ 16131247 (-)
G1907940 NA non-coding downstream 212282 16115049 ~ 16115427 (-)
G1907939 NA non-coding downstream 214948 16112406 ~ 16112761 (-)
G1908029 NA non-coding upstream 133281 16461420 ~ 16476960 (-)
G1908202 LOC106612839 non-coding upstream 289833 16617972 ~ 16622138 (-)
G1908230 LOC106612838 non-coding upstream 307498 16635637 ~ 16641190 (-)
G1908235 NA non-coding upstream 319196 16647335 ~ 16647565 (-)
G1908269 NA non-coding upstream 387027 16715166 ~ 16721539 (-)
G1907951 NA other downstream 166483 16158846 ~ 16161226 (-)
G1907922 NA other downstream 195147 16131990 ~ 16132562 (-)
G1906218 NA other downstream 814616 15512359 ~ 15513093 (-)
G1906198 NA other downstream 826949 15500204 ~ 15500760 (-)
LOC118944080 LOC106612823 other upstream 949668 17277554 ~ 17278524 (-)
LOC110503924 LOC107554284 other upstream 2103885 18432024 ~ 18434798 (-)
LOC110503944 LOC106612932 other upstream 2639923 18968062 ~ 19185772 (-)
G1910398 NA other upstream 2832310 19160449 ~ 19162158 (-)
G1910539 NA other upstream 3004702 19332841 ~ 19333225 (-)

Expression


Co-expression Network