G1907126


Basic Information

Item Value
gene id G1907126
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 17021188 ~ 17024836 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2181146
ATCCAGGCTTGGATCCAGGACCTCCTTTTCCCCCAGGAAGGCctgctccaccaccaccaccaccaccaaagcCCCCGTATCCTGAAACAAGTGGAGAGAAACATCTACCAtctacacacatacaattacacatacatgcagacacaatACTTAAAACATTTACATATGAAAAACTTTCTGTACCAAATGGAAGTTTgcctccagctcctccagcttTCGCTCCATAGCCACCTGTGGAAACCATGGTGACATATAAACGGAATAGAGTAAAGGTTTTGAATATCCGCTAGCACACTGTCAGAAAATCAATTACTTACTTCAATGTTTTTGAACtgtcttttttttaaggtattgaTTTATTGCTGATTTATTCATTTCAGATCCATCCAAATACATAAAACCACACAATTACACTCAAGTATATTCAGCAGTAAACGTTAATGCGTCTAATGTAGAGGGTTAGTAGTTCTACATCATTGTTAAGCTGAAGCAGTTTGGGTTTTTGCATGTGTAAACACAGCTACATTTGTTTCTCATCAAACCGGTGTTGATTTGATTCAGAGATATGACCTAGCCCGCTACAAACATCGAGAAACATTCTGAAAACGAAGCTACGGAACAGACAAGGAGGATTTGTCAGTCCACTCAGATCTTACTATTGCCCCTGAGTGACTACAGATCTGAGAGGAGGCTAAAGGAGAGCTCTAACCTACTGTATGCTTTTGGCTGCATGACACTCTTCCCTGTGAGGGACCACATTCGTTAAATAGATAACTAAGACCATGTTGTCTTAACACACATAATATTAACTGACATTGATTGAAGTGGTGGTCCCTTATAGGGAATGGGTGTGAAGCAGCTAACTTACATACAATACATGACAGGAGCAATCACAGTTTTAGTGGGTTACGGTTCGGAGGTATTGCACTTTTCAGATTCTCGAAGCGTCTTAGAGGGGAAGGTGGTAGATGTATTGTTCTGATTTTGAGGTCTTCCTAGAACGTGATGATGTGACTGCAACAACACATGGAGAAAAGGGTCTCATTTTTGAAAACAACTCAGTTTTGAAGAGGAAAGAAAACACCCTTGTCCCAAAGCCAGGACCTAGGCCTCAAAAAGAGAACGATTCTCAGCAGCCAATTCACAATGATAAACCCACCATACATGACCTGATGCCATAGAGGGGGGTAGCCATAGAACCGCCCGTGCATGTGGCCGTTCATGTGACCGTGGCCGTGCATGGGGCTGTGCATGTGGCCATAATGGGGGTGATGGGGATAAGACACTCTGTGCACTGGAGGGAAAGGAACTGCAACGCACGGTCAACAGTGTGTCAACTTAATTTATAGTGACTGCAAACATCTGACATTTAACATCCATTAAACACTGGGATGATTGTCGTTTAAGGACAATAGTCATAGTTGTTTTTAAATAACTAATGGAGGATTGCCACCTCCAGTTTACCTGCACACGCCAAATGACTATACACTTGTTTTAAcactagctacagtgccttgcgaaagta
>TU2181147
ATCCAGGCTTGGATCCAGGACCTCCTTTTCCCCCAGGAAGGCctgctccaccaccaccaccaccaccaaagcCCCCGTATCCTGAAACAAGTGGAGAGAAACATCTACCAtctacacacatacaattacacatacatgcagacacaatACTTAAAACATTTACATATGAAAAACTTTCTGTACCAAATGGAAGTTTgcctccagctcctccagcttTCGCTCCATAGCCACCTGTGGAAACTTGTGTTTTGGGAGTTTTGAGTGGGTATCCATGGAATACTCCTGGCTGCATTGGTCCTCCGTAACCAACACGACCTGAGCCTCCTGGTCCCTGTTGTCCTCCACCTGGCACTGTAGAGGACAAATCATATcaggcagacagacggacaggcaaacacatgcaggcaggcagatagaGAAACAGACTAGACATGAAAACAATGTGATCTGTAGATGCATGCTACAGGTATCCCAATCAAATGTTACATGATTTGGGATTGAGTCCGTTCCCAGTGGCCACACCAGGCAGCACTCCACGACCACCAAACCCTGCAGACATGAAGAGGAGGGGATCAGAGATTTAGCTAGTAAATGGATTAAGGTTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2181146 False 1525 lncRNA 0.42 2 17021188 17022734
TU2181147 True 606 lncRNA 0.48 2 17021188 17024836
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Neighbor

gene id symbol gene type direction distance location
LOC110503874 LOC106612834 coding upstream 189634 16799736 ~ 16831554 (+)
LOC110503873 mettl16 coding upstream 222949 16763694 ~ 16798239 (+)
LOC110503872 lis1a coding upstream 259124 16675447 ~ 16762064 (+)
LOC110503870 LOC106612837 coding upstream 346313 16648953 ~ 16674875 (+)
LOC110503869 LOC106612838 coding upstream 383786 16628778 ~ 16637402 (+)
LOC110503883 LOC106581053 coding downstream 177190 17202026 ~ 17210391 (+)
LOC110503881 LOC106612827 coding downstream 193140 17217976 ~ 17233704 (+)
LOC118944117 NA coding downstream 196203 17221039 ~ 17221177 (+)
LOC118944116 NA coding downstream 206964 17231800 ~ 17231931 (+)
LOC110503886 LOC106612826 coding downstream 221779 17246615 ~ 17269750 (+)
G1907118 NA non-coding upstream 6135 17013778 ~ 17015053 (+)
G1907112 NA non-coding upstream 26136 16993509 ~ 16995052 (+)
G1907050 NA non-coding upstream 104453 16891814 ~ 16916735 (+)
G1907024 LOC105031346 non-coding upstream 180436 16840195 ~ 16840752 (+)
G1906959 NA non-coding upstream 374090 16646843 ~ 16647098 (+)
G1907216 NA non-coding downstream 215385 17240221 ~ 17315344 (+)
G1907238 NA non-coding downstream 246211 17271047 ~ 17271347 (+)
G1907257 LOC106581067 non-coding downstream 300835 17325671 ~ 17328934 (+)
G1907381 NA non-coding downstream 487083 17511919 ~ 17531753 (+)
G1907447 NA non-coding downstream 549555 17574391 ~ 17574683 (+)
G1906824 NA other upstream 599094 16420898 ~ 16422094 (+)
G1905925 NA other upstream 1767401 15252459 ~ 15253787 (+)
LOC110503347 LOC106612880 other upstream 2297306 14721462 ~ 14729123 (+)
G1904704 LOC106612894 other upstream 2715709 14305187 ~ 14305479 (+)
G1904683 NA other upstream 2751488 14269284 ~ 14269700 (+)
G1907362 NA other downstream 413244 17438080 ~ 17481230 (+)
LOC110503898 LOC106612918 other downstream 653070 17672206 ~ 17678960 (+)
G1909085 NA other downstream 1074546 18099382 ~ 18106291 (+)
LOC110503911 nek8 other downstream 1077118 18090022 ~ 18110579 (+)
G1909262 NA other downstream 1425858 18450694 ~ 18453707 (+)

Expression

G1907126 Expression in all Baseline Samples

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G1907126 Expression in each Bioproject

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G1907126 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network