G1908874


Basic Information

Item Value
gene id G1908874
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 17771194 ~ 17776860 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2183122
gtctagggtTGACCAACTGTTCCCAGTTAaccctagaaacagtgggttaactgccttgttcaggggcaaaatgacagatttttaccatgtcagctcggggattcgatctagcaaccttttggttactggcccaatctTCTAACCACGAGGTTACCTGTCTCCCcgtaagagacaggttatataccctttgttggcaatgacagaggtcaaacgttttttgtaagtcttcacaaggttttcacacactgttgctggtattttggcccattcctccatgcagatctcctctagagcagtgatgttttggggctgttgctgggcaacacggactttcaactccctccaaagattttctatggagttgagatctggagactggctaggccactccaggaccttgaaatgcttcctacgaagccactccttcgttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccatgtttcatcttcaatgcccttgctgaggttttcactcaaaatctcacaatacatggccccattcattctttcctttacacggatcagtcgtcctggtccctttgcaaaaaaacagccccaaagcatgatgtttccacccccatgcttcacagtaggtatggtgttttttattggatgcaactcagcattctttgtcctccaaacaagacaagttgagtttttaccataAAGTTCTATTTTTGGTTtcttctgaccatatgacattctcccaatcttcttctggatcatccaaatgctctctagcaaacttcagacgggcctggacatgtactggcttaagcagggggacacgtctggcactgcaggatttgagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2183122 True 853 lncRNA 0.46 2 17771194 17776860

Neighbor

gene id symbol gene type direction distance location
LOC110503899 LOC106612809 coding downstream 54832 17700305 ~ 17716362 (-)
itgae.2 itgae coding downstream 99920 17658458 ~ 17671274 (-)
LOC110503896 LOC106612812 coding downstream 112923 17640378 ~ 17658271 (-)
LOC110503892 LOC106612816 coding downstream 221701 17533121 ~ 17549493 (-)
LOC110503890 LOC106581067 coding downstream 441771 17325594 ~ 17329423 (-)
LOC110503902 LOC106612804 coding upstream 49332 17826192 ~ 17831204 (-)
LOC110503459 LOC106612753 coding upstream 59079 17835939 ~ 17837025 (-)
LOC118943999 LOC106612753 coding upstream 65848 17842708 ~ 17843664 (-)
LOC118944000 LOC106612753 coding upstream 72613 17849473 ~ 17850429 (-)
wu:fc27b11 NA coding upstream 78430 17855290 ~ 17859396 (-)
G1908849 NA non-coding downstream 38845 17732132 ~ 17732349 (-)
G1908786 NA non-coding downstream 43660 17727281 ~ 17727534 (-)
G1908832 NA non-coding downstream 78911 17691561 ~ 17692283 (-)
G1908831 rrp8 non-coding downstream 79766 17691081 ~ 17691428 (-)
G1908812 NA non-coding downstream 143065 17627929 ~ 17628129 (-)
G1908929 NA non-coding upstream 60279 17837139 ~ 17844116 (-)
G1908932 NA non-coding upstream 71071 17847931 ~ 17854106 (-)
G1908996 NA non-coding upstream 157115 17933975 ~ 17934581 (-)
G1908999 NA non-coding upstream 160853 17937713 ~ 17948050 (-)
LOC110503905 LOC106612802 non-coding upstream 186400 17963258 ~ 18015869 (-)
LOC118944080 LOC106612823 other downstream 492784 17277554 ~ 17278524 (-)
G1907951 NA other downstream 1609968 16158846 ~ 16161226 (-)
G1907922 NA other downstream 1638632 16131990 ~ 16132562 (-)
LOC110503846 NA other downstream 1726889 16036987 ~ 16044740 (-)
G1906218 NA other downstream 2258101 15512359 ~ 15513093 (-)
LOC110503924 LOC107554284 other upstream 655164 18432024 ~ 18434798 (-)
LOC110503944 LOC106612932 other upstream 1191202 18968062 ~ 19185772 (-)
G1910398 NA other upstream 1383589 19160449 ~ 19162158 (-)
G1910539 NA other upstream 1555981 19332841 ~ 19333225 (-)
G1910651 NA other upstream 1713857 19490717 ~ 19491608 (-)

Expression


Co-expression Network