Gene
RNA
| Item | Value |
|---|---|
| gene id | G1908996 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 17933975 ~ 17934581 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| calcium/calmodulin-dependent protein kinase kinase 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2183262 | True | 345 | lncRNA | 0.38 | 3 | 17933975 | 17934581 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503460 | NA | coding | downstream | 7041 | 17923724 ~ 17926934 (-) |
| wu:fc27b11 | NA | coding | downstream | 74579 | 17855290 ~ 17859396 (-) |
| LOC118944000 | LOC106612753 | coding | downstream | 83546 | 17849473 ~ 17850429 (-) |
| LOC118943999 | LOC106612753 | coding | downstream | 90311 | 17842708 ~ 17843664 (-) |
| LOC110503459 | LOC106612753 | coding | downstream | 96950 | 17835939 ~ 17837025 (-) |
| LOC110503905 | LOC106612802 | coding | upstream | 28677 | 17963258 ~ 18015869 (-) |
| ca4 | ca4 | coding | upstream | 54648 | 17989229 ~ 17999629 (-) |
| LOC110503907 | LOC106612799 | coding | upstream | 103007 | 18037588 ~ 18042701 (-) |
| LOC110503908 | LOC106612797 | coding | upstream | 127416 | 18061997 ~ 18069560 (-) |
| LOC110503909 | LOC106612796 | coding | upstream | 140635 | 18075216 ~ 18081425 (-) |
| G1908932 | NA | non-coding | downstream | 79869 | 17847931 ~ 17854106 (-) |
| G1908929 | NA | non-coding | downstream | 89859 | 17837139 ~ 17844116 (-) |
| G1908874 | NA | non-coding | downstream | 157115 | 17771194 ~ 17776860 (-) |
| G1908849 | NA | non-coding | downstream | 201626 | 17732132 ~ 17732349 (-) |
| G1908786 | NA | non-coding | downstream | 206441 | 17727281 ~ 17727534 (-) |
| G1908999 | NA | non-coding | upstream | 3132 | 17937713 ~ 17948050 (-) |
| G1909024 | NA | non-coding | upstream | 66652 | 18001233 ~ 18007350 (-) |
| G1909345 | NA | non-coding | upstream | 117273 | 18051854 ~ 18052194 (-) |
| G1909357 | NA | non-coding | upstream | 151466 | 18086047 ~ 18086265 (-) |
| LOC118944080 | LOC106612823 | other | downstream | 655565 | 17277554 ~ 17278524 (-) |
| G1907951 | NA | other | downstream | 1772749 | 16158846 ~ 16161226 (-) |
| G1907922 | NA | other | downstream | 1801413 | 16131990 ~ 16132562 (-) |
| LOC110503846 | NA | other | downstream | 1889670 | 16036987 ~ 16044740 (-) |
| G1906218 | NA | other | downstream | 2420882 | 15512359 ~ 15513093 (-) |
| LOC110503924 | LOC107554284 | other | upstream | 497443 | 18432024 ~ 18434798 (-) |
| LOC110503944 | LOC106612932 | other | upstream | 1033481 | 18968062 ~ 19185772 (-) |
| G1910398 | NA | other | upstream | 1225868 | 19160449 ~ 19162158 (-) |
| G1910539 | NA | other | upstream | 1398260 | 19332841 ~ 19333225 (-) |
| G1910651 | NA | other | upstream | 1556136 | 19490717 ~ 19491608 (-) |
