G1909572


Basic Information

Item Value
gene id G1909572
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 18456536 ~ 18457218 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2183936
gtaaaactcTGAGAACACAGAGACATCCTTAAGGGAGCAACCTAATAAGATGTAAAAATTGAAGACCAGATAAAGCATCGTCATTAAATGTTTTAATTAGGTTCGAACAGAAAAAAATAGCTACTGCCCCAATGGAGACGGCTAAATATAATCTAAGCACAAGTCCCAGTCATCTTCCTAAAATGTCTCCTGAATAGGAAGGTGTAgtgggctcctctctctgtggtcTGACAATGAATTCCCCTTCAGGCCCTTGTCTTAAACAGGtctggtacagtatgtctgtggtGTTAGTCCAGTGACCCACATCTTTACATTGGTAGACACCTCTAGCACACTGACACAattatggagggagggatggagaagtcCCATAAAATAACACCAGAACAAGTGAGATATCCTAGAAAAGTGGGAACACGTATTTTTTCATTTCTATACAGAAAATGGGAGATATTCAACTTGCCAAATAAAGGATCAAATTCAAACACTTGAAGAGACTTTATATAATGCCTGCATGATTGAATTAAGTATTTACTGTCAAATGCATGTCATtctttatagaattacatatgcATTTTATCCAACCACTTCAAGTGGAAATGTATCAACTGAAAATGCCACCATAAAGACAATGTAGCCTATCACTGTTGATCTTCATGTGATGGACCTGATTATTGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2183936 True 683 lncRNA 0.38 1 18456536 18457218

Neighbor

gene id symbol gene type direction distance location
LOC110503925 LOC106612788 coding downstream 938 18450674 ~ 18455598 (-)
LOC110503923 LOC106612789 coding downstream 8983 18437538 ~ 18447553 (-)
LOC110503924 LOC107554284 coding downstream 21738 18432024 ~ 18434798 (-)
LOC110503921 LOC106612790 coding downstream 73346 18363095 ~ 18383190 (-)
LOC110503920 LOC106612791 coding downstream 101057 18311939 ~ 18355479 (-)
LOC110503927 kiaa0100 coding upstream 8181 18465399 ~ 18494798 (-)
LOC110503930 LOC106612786 coding upstream 38050 18495268 ~ 18501115 (-)
LOC110503929 LOC106612785 coding upstream 46858 18504076 ~ 18561364 (-)
LOC110503933 txndc17 coding upstream 104712 18561930 ~ 18566131 (-)
slc47a3 NA coding upstream 300128 18757346 ~ 18764696 (-)
G1909483 NA non-coding downstream 45507 18326648 ~ 18411029 (-)
G1909484 NA non-coding downstream 146050 18309787 ~ 18310486 (-)
G1909496 NA non-coding downstream 167992 18286714 ~ 18288544 (-)
G1909495 NA non-coding downstream 170361 18283361 ~ 18286175 (-)
G1909470 NA non-coding downstream 188888 18267313 ~ 18267648 (-)
G1909868 NA non-coding upstream 216861 18674079 ~ 18674678 (-)
G1909869 NA non-coding upstream 218459 18675677 ~ 18677393 (-)
G1909902 NA non-coding upstream 282847 18740065 ~ 18740282 (-)
G1909911 NA non-coding upstream 297770 18754988 ~ 18755486 (-)
LOC118944080 LOC106612823 other downstream 1178126 17277554 ~ 17278524 (-)
G1907951 NA other downstream 2295310 16158846 ~ 16161226 (-)
G1907922 NA other downstream 2323974 16131990 ~ 16132562 (-)
LOC110503846 NA other downstream 2412231 16036987 ~ 16044740 (-)
LOC110503944 LOC106612932 other upstream 510844 18968062 ~ 19185772 (-)
G1910398 NA other upstream 703231 19160449 ~ 19162158 (-)
G1910539 NA other upstream 875623 19332841 ~ 19333225 (-)
G1910651 NA other upstream 1033499 19490717 ~ 19491608 (-)
G1910996 NA other upstream 1233848 19691066 ~ 19691513 (-)

Expression


Co-expression Network