G1909971



Basic Information


Item Value
gene id G1909971
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 18880687 ~ 18880959 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2184370
agaccctgctaggtaaagtccccccttatctcagctcgctggtcaccatagcatctcccacctgtagcacacgctccagcaggtatatctctctagtcacccccaaaaccaattctttctttggccgcccctctttccagttctctgctgccaatgactggaacgaactacaaaaatctctgaaactggaaacacttatctccctcactagctttaagcaccaactgtcagagcagctcacagattactgcacctgtacatagcccacctata

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2184370 True 273 lncRNA 0.49 1 18880687 18880959

Neighbor


gene id symbol gene type direction distance location
wdr81 wdr81 coding downstream 66887 18795254 ~ 18813800 (-)
LOC110503941 LOC106612935 coding downstream 85875 18789219 ~ 18794812 (-)
slc13a5b LOC106612936 coding downstream 92760 18775256 ~ 18787927 (-)
slc47a3 NA coding downstream 115991 18757346 ~ 18764696 (-)
LOC110503933 txndc17 coding downstream 314556 18561930 ~ 18566131 (-)
LOC110503944 LOC106612932 coding upstream 90722 18968062 ~ 19185772 (-)
LOC118944057 NA coding upstream 516395 19397081 ~ 19398144 (-)
LOC118944022 NA coding upstream 617603 19498562 ~ 19502464 (-)
LOC110503947 LOC106613039 coding upstream 625219 19506178 ~ 19517866 (-)
tsr1 LOC106613038 coding upstream 644937 19525896 ~ 19542981 (-)
G1909960 NA non-coding downstream 5762 18874723 ~ 18874925 (-)
G1909930 LOC106612933 non-coding downstream 54844 18819253 ~ 18825843 (-)
G1909927 NA non-coding downstream 65659 18814701 ~ 18815028 (-)
G1909924 NA non-coding downstream 69192 18811071 ~ 18811495 (-)
G1909845 NA non-coding downstream 105514 18773602 ~ 18775173 (-)
G1909982 NA non-coding upstream 5871 18886830 ~ 18887147 (-)
G1909993 NA non-coding upstream 15082 18896041 ~ 18896274 (-)
G1909996 NA non-coding upstream 16568 18897527 ~ 18897808 (-)
G1910228 NA non-coding upstream 22612 18903571 ~ 18929528 (-)
G1910266 NA non-coding upstream 75319 18956278 ~ 18963198 (-)
LOC110503924 LOC107554284 other downstream 445895 18432024 ~ 18434798 (-)
LOC118944080 LOC106612823 other downstream 1602277 17277554 ~ 17278524 (-)
G1907951 NA other downstream 2719461 16158846 ~ 16161226 (-)
G1907922 NA other downstream 2748125 16131990 ~ 16132562 (-)
LOC110503846 NA other downstream 2836382 16036987 ~ 16044740 (-)
G1910398 NA other upstream 279490 19160449 ~ 19162158 (-)
G1910539 NA other upstream 451882 19332841 ~ 19333225 (-)
G1910651 NA other upstream 609758 19490717 ~ 19491608 (-)
G1910996 NA other upstream 810107 19691066 ~ 19691513 (-)

Expression



Co-expression Network