G1910495


Basic Information

Item Value
gene id G1910495
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 19286273 ~ 19289313 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2184957
CGTACTGTACATCATACTGAACATACAGCccatcatactgtacatacagcccatcatactgtacatacagcccatcacactgtacatacagcccATCATAACGTACATACAGCCCATCATACTGTACCACACAGCCCATCATACTGCccatcatactgtacatacagcccatcatactgtacatacagcccatcattcagtacatacagcccatcacactgtacatactgtacatactgcccATCATAATGTAGATACAGCCCATCatacagaccatcaaactgtacatacagcccatcacactgtacatacagcccatcatattgtaccatacagcccatcacactgtacatacagcccatcatactgtacatacatcccatcatactgtacatacagcccatcacactgtaccatacagcccatcacactgtacatacagcccatcac
>TU2184956
CGTACTGTACATCATACTGAACATACAGCccatcatactgtacatacagcccatcatactgtacatacagcccatcacactgtacatacagcccATCATAACGTACATACAGCCCATCATACTGTACCACACAGCCCATCATACTGCccatcatactgtacatacagcccatcatactgtacatacagcccatcattcagtacatacagcccatcacactgtacatactgtacatactgcccATCATAATGTAGATACAGCCCATCatacagaccatcaaactgtacatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaggaTATAAAACtggaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctctagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2184957 False 450 lncRNA 0.44 3 19286273 19289313
TU2184956 True 781 lncRNA 0.41 2 19288121 19289313

Neighbor

gene id symbol gene type direction distance location
LOC110503944 LOC106612932 coding downstream 100501 18968062 ~ 19185772 (-)
wdr81 wdr81 coding downstream 472473 18795254 ~ 18813800 (-)
LOC110503941 LOC106612935 coding downstream 491461 18789219 ~ 18794812 (-)
slc13a5b LOC106612936 coding downstream 498346 18775256 ~ 18787927 (-)
slc47a3 NA coding downstream 521577 18757346 ~ 18764696 (-)
LOC118944057 NA coding upstream 108041 19397081 ~ 19398144 (-)
LOC118944022 NA coding upstream 209249 19498562 ~ 19502464 (-)
LOC110503947 LOC106613039 coding upstream 216865 19506178 ~ 19517866 (-)
tsr1 LOC106613038 coding upstream 236583 19525896 ~ 19542981 (-)
gmfg gmfg coding upstream 297597 19586910 ~ 19589097 (-)
G1910449 NA non-coding downstream 57033 19228756 ~ 19229240 (-)
G1910403 NA non-coding downstream 119863 19166167 ~ 19166410 (-)
G1910402 NA non-coding downstream 120985 19165080 ~ 19165288 (-)
G1910397 NA non-coding downstream 126591 19159477 ~ 19159682 (-)
G1910396 NA non-coding downstream 127237 19158741 ~ 19159036 (-)
G1910513 NA non-coding upstream 23835 19313148 ~ 19313613 (-)
G1910515 NA non-coding upstream 25055 19314368 ~ 19314605 (-)
G1910533 NA non-coding upstream 39133 19328446 ~ 19328780 (-)
G1910545 NA non-coding upstream 48175 19337488 ~ 19337923 (-)
G1910563 NA non-coding upstream 68375 19357688 ~ 19358074 (-)
G1910398 NA other downstream 124115 19160449 ~ 19162158 (-)
LOC110503924 LOC107554284 other downstream 851481 18432024 ~ 18434798 (-)
LOC118944080 LOC106612823 other downstream 2007863 17277554 ~ 17278524 (-)
G1907951 NA other downstream 3125047 16158846 ~ 16161226 (-)
G1910539 NA other upstream 43528 19332841 ~ 19333225 (-)
G1910651 NA other upstream 201404 19490717 ~ 19491608 (-)
G1910996 NA other upstream 401753 19691066 ~ 19691513 (-)
G1911862 NA other upstream 1171355 20460668 ~ 20461437 (-)
G1912470 NA other upstream 1683366 20972679 ~ 20976236 (-)

Expression


Co-expression Network