G1912303



Basic Information


Item Value
gene id G1912303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 20656300 ~ 20656725 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2186980
cctacggctattcttcaacataattgcgtaaaactacgtcacaatgctgtagacactttggggaatacgtagaaagcgtaaactggttgatagcacattcacagctcaatagggagtcattggaacgcagtgctttcaaaatatggggcacttccggattggatttttctcaggctttcacctgcaacatcagttctgttatactcacagacaatatctttacagttttggaaacgttagagtgttttctatccaacgctgtcaattatatgcatattctaggatcttgtcctgacaaaatatcccgtttaaaacgggaacgttttttttttccaaaaatgaaaatactgcccctagagtcgcaacaggatTTATTAAACtcatacaattgctcagagaaaaatgtttgtttaacaagtaatactc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2186980 True 426 lncRNA 0.38 1 20656300 20656725

Neighbor


gene id symbol gene type direction distance location
LOC110503970 LOC106613014 coding downstream 104152 20483265 ~ 20552148 (-)
LOC110503968 NA coding downstream 197808 20455336 ~ 20458492 (-)
LOC110503964 LOC106613021 coding downstream 251133 20315054 ~ 20405167 (-)
LOC110503963 LOC106613022 coding downstream 331986 20278992 ~ 20324314 (-)
LOC110503959 ncam1 coding downstream 596397 19941892 ~ 20059903 (-)
LOC110503972 LOC106613013 coding upstream 10156 20666881 ~ 20676630 (-)
LOC110503975 LOC106613012 coding upstream 41036 20697761 ~ 20724730 (-)
LOC110503976 NA coding upstream 68183 20724908 ~ 20752174 (-)
LOC110503985 NA coding upstream 277749 20934474 ~ 20941504 (-)
LOC110503987 LOC106613003 coding upstream 294193 20950918 ~ 20961641 (-)
G1912302 NA non-coding downstream 796 20654963 ~ 20655504 (-)
G1912301 NA non-coding downstream 1763 20654331 ~ 20654537 (-)
G1912300 NA non-coding downstream 2712 20652523 ~ 20653588 (-)
G1912018 NA non-coding downstream 17346 20638726 ~ 20638954 (-)
G1911949 NA non-coding downstream 79082 20576933 ~ 20577218 (-)
G1912304 NA non-coding upstream 267 20656992 ~ 20657286 (-)
G1912305 NA non-coding upstream 1725 20658450 ~ 20658731 (-)
G1912306 NA non-coding upstream 2149 20658874 ~ 20659162 (-)
G1912315 NA non-coding upstream 30586 20687311 ~ 20687575 (-)
G1912319 NA non-coding upstream 33669 20690394 ~ 20690695 (-)
G1911862 NA other downstream 194863 20460668 ~ 20461437 (-)
G1910996 NA other downstream 964787 19691066 ~ 19691513 (-)
G1910651 NA other downstream 1164692 19490717 ~ 19491608 (-)
G1910539 NA other downstream 1323075 19332841 ~ 19333225 (-)
G1910398 NA other downstream 1494142 19160449 ~ 19162158 (-)
G1912470 NA other upstream 315954 20972679 ~ 20976236 (-)
G1913665 NA other upstream 1206863 21863588 ~ 21864274 (-)
G1913663 NA other upstream 1214528 21871253 ~ 21872149 (-)
G1915836 NA other upstream 3095118 23751843 ~ 23752463 (-)
LOC110504083 NA other upstream 5506740 26163462 ~ 26165289 (-)

Expression



Co-expression Network