G1912454


Basic Information

Item Value
gene id G1912454
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 20948535 ~ 20950217 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2187168
GTGAGTGCAATGCCATGAACCCATAAAAAGAACAAAAAACGTTTtgttatttaactatgcaagccagttaagagcaaattattatttacaataatggCCTACTAAGGCCAAACCCGggtgatgctgggccaattgtgcgtcagaTGTGaagcagcctggattcaaaccagagactgcagtgatgcctcttgcactgagatgcagtgccttacaccgctgtgccactcggagACCTAAAACTCATAAAGggctcattttattttttttgcagtcTTATTATTGTTCAGTTAGTAACCAGCATGATTGAGGGCTTGGTAAAATCatttaaataaacatttattttgtatttttatattattcattttgaatgtgcctttaaacgtACCTGTATTCGTCTTGGAGGAAGGTGATTCTATTTTGCAGACAAGCACCTCATTCACTCCTCCAATCTCCTTCACTTAGTACAGACTACATGATATATCAATGTatcaatgatgtcgttcttgctgtgggtgattctttgattcacctctacgcagacgacaccattctgtatacatctggcccttctttggacactgtgttaacaaaactccaaatgagcttcaacgccatacaacactccttctgtggcctccaactgctctccttccagactcatattaaacaaaatgcatgctcttcaaccgatcgctgcccacacttGCCCGCCCGacaagcatcactactctggacgcttctgacttaaaatatgtggacaactgtaaatacctaggtgtctggctagactgtaaactctccttctagactcatattaagcctctccaatccaaagttaaatctagaattggcgtCCTATTTCGCACTCATTTTACCACACCCTGGTAAAACTGACTAAaacttgacttcggcgatgtcatttacaaaatagcctccaacactctattgCAATGCCACCAAAGCACCATATTTATTTAActtggtaagtcagttaagaacacattcttattttcaatgcctgccttgttcaggggcagaacgacagatttttaccttgtcagctcagggatttgatcttgcaaccttccggtcactggtccaacactctaaccactaggctaccaccttatctcagctcacaggttaccataacaacacccacccgtagcacacactccagcaggtatatttcactggtccttCCCAAAGCCAAtacctctttggccgcctttccttccagttctctgctaccattGACTGGAACGAATGTTAAAAATCACTGAAATTGGAGACTTAtaactccctcactaactttacgcatcagctgtcagagcagcttacagatcgctgcagctgtacacagcccatgtgtaaacagcccatccaaccaactacctacccatctcatccccatatttgtttttgtttttccgctcttttgcacaccagtatttctacttgcacatcctcatctgtacatctatcactcccgtgtaaattgctaaattgtaattacttcaccactattggcctatttattgtcttacctccttactttatttgcacacactgtatacagatgcttcaattgtgttattgactgtacgtttatttatcccacgtgtaactctgtgttgttggttttgccacactgctttgctttatattggccaggtcgcagtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2187168 True 1683 lncRNA 0.42 1 20948535 20950217

Neighbor

gene id symbol gene type direction distance location
LOC110503985 NA coding downstream 7031 20934474 ~ 20941504 (-)
LOC110503976 NA coding downstream 196361 20724908 ~ 20752174 (-)
LOC110503975 LOC106613012 coding downstream 223805 20697761 ~ 20724730 (-)
LOC110503972 LOC106613013 coding downstream 271905 20666881 ~ 20676630 (-)
LOC110503970 LOC106613014 coding downstream 396387 20483265 ~ 20552148 (-)
LOC110503987 LOC106613003 coding upstream 701 20950918 ~ 20961641 (-)
LOC110503988 LOC106613001 coding upstream 79567 21029784 ~ 21064377 (-)
LOC110503989 LOC106613000 coding upstream 117429 21067646 ~ 21081164 (-)
LOC110503992 LOC106612997 coding upstream 138518 21088735 ~ 21111304 (-)
LOC110503990 LOC106612996 coding upstream 161854 21112071 ~ 21117277 (-)
G1912439 NA non-coding downstream 1368 20945023 ~ 20947167 (-)
G1912462 NA non-coding downstream 22126 20926170 ~ 20926409 (-)
G1912385 NA non-coding downstream 113132 20812821 ~ 20835403 (-)
G1912320 LOC107668442 non-coding downstream 257352 20690820 ~ 20691183 (-)
G1912469 NA non-coding upstream 18230 20968447 ~ 20970558 (-)
G1912483 NA non-coding upstream 56950 21007167 ~ 21007641 (-)
G1912496 NA non-coding upstream 115813 21066030 ~ 21066341 (-)
G1913254 NA non-coding upstream 135608 21085825 ~ 21086059 (-)
G1913296 NA non-coding upstream 221426 21171643 ~ 21175302 (-)
G1911862 NA other downstream 487098 20460668 ~ 20461437 (-)
G1910996 NA other downstream 1257022 19691066 ~ 19691513 (-)
G1910651 NA other downstream 1456927 19490717 ~ 19491608 (-)
G1910539 NA other downstream 1615310 19332841 ~ 19333225 (-)
G1910398 NA other downstream 1786377 19160449 ~ 19162158 (-)
G1912470 NA other upstream 22462 20972679 ~ 20976236 (-)
G1913665 NA other upstream 913371 21863588 ~ 21864274 (-)
G1913663 NA other upstream 921036 21871253 ~ 21872149 (-)
G1915836 NA other upstream 2801626 23751843 ~ 23752463 (-)
LOC110504083 NA other upstream 5213248 26163462 ~ 26165289 (-)

Expression


Co-expression Network