G1912470


Basic Information

Item Value
gene id G1912470
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 20972679 ~ 20976236 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2187184
tataaatggcatattattgaaaaaaaaaatatgtactgtgtaatatgtcatattactgtcatctgatgaagattttcaaaaggttagtgagtgatttattttttaatcctgcgtttgttgattgcatgttttggctattgaaatgagctgtgtctggtggtggttttacatatatatgtgctatgttttcgccgtaaaacattttagaaatctgacttgctggctagatgaacaagatgtttatctttcatttgagctattggacttgttaatgtgtggaggttaaatatttttaagaatatttttgcgttccatgcgccaccgtttcagctgaacgtgggagggttgattcccaattgggaaccagtatcgtagacaggttaaacaatttaaaggcaatgctaccaaatactaattgagtgtatgtaaacttctgaccaactgggaatgtgatgaaagaaataaaagctgaaataaataataattatctttactattattctgccatttcacattcttaaagtggtgatcctaacttacctaagacatgacatttttactctgattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttagctaaggggtttgtaaacttccgacttcaactgtagttacaGTGTGCCTGTGCCACCTAGCATGGCCGTACAAAGCTAACTAGCTGGCCATTTtttataacgttagctagctagctggaatTTCCAACCTTGGAAAGAGACGTAAACATTAGCTAGCGAGTAACGTTAACATTAAGTTACTGTAGTTAGTAAATGCTAGCCCTTTATCGTTGTACAAATACTGATACAATTGGAATGCTCTCTAAACAttactgtaataaacattgttaacTAATTTTCACATTTGAACTTACTTACTATGTTGTCATTTTCCCTCCAATGTTTTGATCCACTTCcgtctttgtcttcttcttcttgaaGATTAGGTTGGTGGATCGCATCCAACATTTAAGATGCATACACAgccacctactgtactgatgCCAGTCACTCCGGACTGTGATGCCAGtcactccggatattttggaggcatttctgaacatggcgtcaatgtaaaccgagatttgtggatataaatatgcatattatcgaacaaaacataaatgtatgagtgtcatctgatgaagattatcaaaggttagtgattaattgtatctctaattctgcttttatgactatctttggctgggaaaaattgCTGTGTGTTTTTggggatttggtggtgatctaacataaatatatgttgtgttttctctgacacaatgggtagattaacaagatgtttatctttcatttgctgtattggacttgttaatgtgtgaaagttaaatatttctaaaaaatatttttgaatttcccttgctgccttttcagcggaatgttggggGGTGAGGGTTCCGTTAGCGGAAcgtgtgtcctagacaggttttAACCTGTCTGGGATAtgtgctagcgtcccacctggccaaaagccagggaaaatgcagagagccaaattcaaataaattactataaatatcaaaactttcattaaatcacacatgcaaaatagcaaattaaagctatacttgttgtgaatccagccaacatgtcagatttcaaaaaggcttttcggcgaaagcaaacaatgctattatctgaggatagcacctccgtaaacaaagagagaaaccatatttaaccccgcaggcgcgacacaaaatgcagaaataaaaatataattcatgccttacctttgacgagcttcttttgttggcactccaatatgtcccataaacatcacaaatggtccttttgtttgattaattccatcgatatatccaaaatgtccattcatttggcgcgtttgatccagaaaaacaccggttccaacttgcgcaacgtgactacaaaatatctcaaaagttacctgtaaactttgccaaaacatttcaaactacttttgtaatacaactttaggtattttttaacgtaaataatcgataaaattgaagaagggatgatctgtgttcaatacaggaagaaaacagacagtagctagctttctggtcatgagcttctatctaacagtacacttcaagtgaccctcgttcaagatggccgtacttcttcattacacaaaggaataacctcaaccaatttctaaagacttttgacatccagtggaagcgataggaactgcaagaaggtcccttagaaatctggattcccaatgaaaaattATTGAAAatagagtgacctcaaaaaaaatatctgaatggtttgtcctcggtgtttcgcctgctaaataagttctgttatactcacagacatgattcaaacagtttaagaaacgtcagagtgttttctatccaaatatactaataatatgcatatcttatcttctggggatgagtagcaggcagttgaatttcggcatgcatttcatccggacgtgaaaatactgcccctggtcaccaagaagttaagtaTTGAGTGAATGAGAGCTGTCAGGGGACTAGCTTACATGTGAAAGAGGTGAATGAATGCCACAACCAGTTCTGTGTGAGCTGATCTGTAATGTTATCTAGGGGTCTGTCCAACACCGCTGTTGGTAGAGGATAACAGGTATCAGAAATCTCATACATAACATGTCTTGTTAGTaacgaggattaaatgtctgaGGTTAAGATGACTAGATTATATGAGGATAACATGTCTCATCAGGGAAATTTGATGGTATTACATTATGGAGAGCTATTTCTTAATATTCTGTTAAATAGAGCTAGTGTAAATATTTTCACCCCTGTATGAATAGAACACTAGTCTAAAGGAGGAatttgtaatgtaacaaatgtaTAATGGGTTACTACAGTTAAACTAACATAATATTGAGTATAATGAGTTAATATGATGATCTGATGAAGTATGAATAGAAAAATATACAATTTGCACACCCAcactgttacggatacaggtatcctgtgtgtgtgtgtgtgtatcctatgtgtatttcttttctctccttctcctctcacaGGTGGCAATCATCATTCCCCAATCAGTCATCATTCAGAAGACACCTGCTCCTTTTCCATTACCCTATCACATCCCATTTCCCTTAGTTTAAAAACCCATTCAGTTGTTTCTTCTGGAGCTCGATCTCTTTGTGTTtcattctctctgtgtctctctcttaatctctctcaatatctcgctctatatctctctctctctggattgaGCTCTTTTGTTTTTGCAACTACATGTCACTTTGTccccacctgtgagtattgttttggttatggtgtttgactgtttgtttgatggtgggaaaagggggtacCAAGACAAGTTGCCCATGGGCATACATTACCTGTAGGAATACTTTGTCTAAATaccctagttagaactgggcggaccacccgctgtatttttggttagttagctgtatagtagtaggctagtctagcttaggggtgtttttggatatttgtttctttccttgggtccagctcagccccttttcctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2187184 True 3558 TUCP 0.37 1 20972679 20976236

Neighbor

gene id symbol gene type direction distance location
LOC110503987 LOC106613003 coding downstream 11038 20950918 ~ 20961641 (-)
LOC110503985 NA coding downstream 31175 20934474 ~ 20941504 (-)
LOC110503976 NA coding downstream 220505 20724908 ~ 20752174 (-)
LOC110503975 LOC106613012 coding downstream 247949 20697761 ~ 20724730 (-)
LOC110503972 LOC106613013 coding downstream 296049 20666881 ~ 20676630 (-)
LOC110503988 LOC106613001 coding upstream 53548 21029784 ~ 21064377 (-)
LOC110503989 LOC106613000 coding upstream 91410 21067646 ~ 21081164 (-)
LOC110503992 LOC106612997 coding upstream 112499 21088735 ~ 21111304 (-)
LOC110503990 LOC106612996 coding upstream 135835 21112071 ~ 21117277 (-)
LOC118944112 LOC106612996 coding upstream 140873 21117109 ~ 21126584 (-)
G1912469 NA non-coding downstream 2121 20968447 ~ 20970558 (-)
G1912454 NA non-coding downstream 22462 20948535 ~ 20950217 (-)
G1912439 NA non-coding downstream 25512 20945023 ~ 20947167 (-)
G1912462 NA non-coding downstream 46270 20926170 ~ 20926409 (-)
G1912483 NA non-coding upstream 30931 21007167 ~ 21007641 (-)
G1912496 NA non-coding upstream 89794 21066030 ~ 21066341 (-)
G1913254 NA non-coding upstream 109589 21085825 ~ 21086059 (-)
G1913296 NA non-coding upstream 195407 21171643 ~ 21175302 (-)
G1913393 NA non-coding upstream 369064 21345300 ~ 21345641 (-)
G1911862 NA other downstream 511242 20460668 ~ 20461437 (-)
G1910996 NA other downstream 1281166 19691066 ~ 19691513 (-)
G1910651 NA other downstream 1481071 19490717 ~ 19491608 (-)
G1910539 NA other downstream 1639454 19332841 ~ 19333225 (-)
G1910398 NA other downstream 1810521 19160449 ~ 19162158 (-)
G1913665 NA other upstream 887352 21863588 ~ 21864274 (-)
G1913663 NA other upstream 895017 21871253 ~ 21872149 (-)
G1915836 NA other upstream 2775607 23751843 ~ 23752463 (-)
LOC110504083 NA other upstream 5187229 26163462 ~ 26165289 (-)
LOC110503381 LOC106613064 other upstream 5234180 26208892 ~ 26241410 (-)

Expression


Co-expression Network