G1912155


Basic Information

Item Value
gene id G1912155
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 20977329 ~ 21005364 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2186823
gacacagctggtgtaactgagtcaggtttgtaggcctccttgttcacacacactttttcagttctgcccacacatttgctataggattgaggtcagagctttgtgatggccactccaataccttgactttgttgaccttaagccattttgccactactttggaagtatgcttggggtcattgtctatttggaaaaCTCATTtacgaccaagatttaacttcctgactgatgtcttgagatgttgcttcaatatatccacagaattttcctgtctcatgatgctatctatttcatgaagtgcactagtccctcctgcagcaaagcacccccataacatgatgctgccagtcCCGTGCTTCAttgttggaatggtgttcttcggcttgcaagcctccccctttttcctccaaacataacgatggtcattatggccaaactatttttgtttcatcagaccaaaagacatttctccaaaaagtacaatcttcgtccccatgtgcagttgcaaaccgtagtctggctattttatggcggttttggagcagtggcttcttccttgctgagcggcctttcaggttatgtcgatatagaactaattttactgtggatatagataattttgtacctgtttcctccagcatcttcacagggtcctttgctgttgttctgggattgatttgcacttttcgcatgaaagtacgttcatctctaggagacagaacgggtctccttcctgagcggtataatggctgtgtggtcccatggtgtttatacttgcgtactattgtttgtacagatgaatgtggtaccttcaggggttttggaaattgctcccaaggatgaaccagacttgtagaagtctacaattattttctggggtcttggctgatttcttttgattttcccatgatgtcaagcaaagaggcactgagtttgaaggtactccttgaaatacatccacaggtacacctgcaattgactcaaattatgtcaattagcctatcagaagcttctaaagtcatgacatcattttctggacttttccaagctgtttaaaggcacagtcaacttagtgtatgtaaacttctgatccactgggattgtgaaacagtgaattataagtgaaataatctgcctgtaaacaattgtttgaaaaattacttttATCATGCACAAAGAAAATGTCCtaaatgacttgccaaaactatagtttgttaacaagaaatgtgtggagtggttgaaaaacgagttttaatgactccaacctaagtgtatgtaaacttccgacttcaactgtatattacacAATACCAGTCTCATCGTCAACATTGAAGAGGCGACtgcaggatgctggccttctaggcagagttcctctgtccagtgtctgtgttcttttgcccatcttaatattttctttttattggcctgtctgagatatggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2186823 True 1441 lncRNA 0.41 2 20977329 21005364

Neighbor

gene id symbol gene type direction distance location
LOC110503984 LOC106613004 coding upstream 30160 20941518 ~ 20947169 (+)
LOC110503981 LOC106613007 coding upstream 55633 20918141 ~ 20921696 (+)
trnap-cgg-208 NA coding upstream 59849 20917409 ~ 20917480 (+)
LOC110503980 LOC106613008 coding upstream 60216 20904412 ~ 20917113 (+)
LOC110503979 LOC106613009 coding upstream 73980 20834482 ~ 20903349 (+)
LOC110503368 NA coding downstream 75837 21081201 ~ 21087692 (+)
LOC118944113 NA coding downstream 106072 21111436 ~ 21117258 (+)
LOC110503464 NA coding downstream 123536 21128900 ~ 21130365 (+)
LOC118944065 NA coding downstream 125080 21130444 ~ 21133576 (+)
atm atm coding downstream 146539 21151903 ~ 21194602 (+)
G1912228 NA non-coding upstream 615 20976514 ~ 20976714 (+)
LOC110503367 LOC106613002 non-coding upstream 6072 20970649 ~ 20992529 (+)
G1912223 NA non-coding upstream 8989 20967970 ~ 20968340 (+)
G1912221 NA non-coding upstream 11587 20965427 ~ 20965742 (+)
G1912220 NA non-coding upstream 13473 20962861 ~ 20963856 (+)
G1912266 NA non-coding downstream 36427 21041791 ~ 21042133 (+)
G1912267 LOC106613001 non-coding downstream 37843 21043207 ~ 21043570 (+)
G1912554 NA non-coding downstream 145767 21151131 ~ 21151674 (+)
G1912558 NA non-coding downstream 168268 21173632 ~ 21175304 (+)
G1911474 NA other upstream 669937 20304763 ~ 20307392 (+)
G1911460 LOC105030512 other upstream 691263 20284320 ~ 20286066 (+)
G1910697 NA other upstream 1357599 19619418 ~ 19619730 (+)
G1909739 wdr81 other upstream 2180051 18789221 ~ 18797278 (+)
G1909273 kiaa0100 other upstream 2503502 18473203 ~ 18473827 (+)
G1912565 LOC106612993 other downstream 195772 21201136 ~ 21202449 (+)
sacs LOC106612984 other downstream 654798 21648371 ~ 21683308 (+)
G1913153 NA other downstream 1188426 22193790 ~ 22194607 (+)
G1915361 LOC106611080 other downstream 2419825 23425189 ~ 23426072 (+)
G1916129 NA other downstream 3006901 24012265 ~ 24012808 (+)

Expression


Co-expression Network