Gene
RNA
| Item | Value |
|---|---|
| gene id | G1913254 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 21085825 ~ 21086059 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: high mobility group protein B2 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2188058 | True | 235 | lncRNA | 0.46 | 1 | 21085825 | 21086059 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503989 | LOC106613000 | coding | downstream | 4661 | 21067646 ~ 21081164 (-) |
| LOC110503988 | LOC106613001 | coding | downstream | 21448 | 21029784 ~ 21064377 (-) |
| LOC110503987 | LOC106613003 | coding | downstream | 124184 | 20950918 ~ 20961641 (-) |
| LOC110503985 | NA | coding | downstream | 144321 | 20934474 ~ 20941504 (-) |
| LOC110503976 | NA | coding | downstream | 333651 | 20724908 ~ 20752174 (-) |
| LOC110503992 | LOC106612997 | coding | upstream | 2676 | 21088735 ~ 21111304 (-) |
| LOC110503990 | LOC106612996 | coding | upstream | 26012 | 21112071 ~ 21117277 (-) |
| LOC118944112 | LOC106612996 | coding | upstream | 31050 | 21117109 ~ 21126584 (-) |
| LOC110503993 | LOC106612995 | coding | upstream | 53457 | 21139516 ~ 21151675 (-) |
| LOC110503995 | LOC106612993 | coding | upstream | 115074 | 21201133 ~ 21212559 (-) |
| G1912496 | NA | non-coding | downstream | 19484 | 21066030 ~ 21066341 (-) |
| G1912483 | NA | non-coding | downstream | 78184 | 21007167 ~ 21007641 (-) |
| G1912469 | NA | non-coding | downstream | 115267 | 20968447 ~ 20970558 (-) |
| G1912454 | NA | non-coding | downstream | 135608 | 20948535 ~ 20950217 (-) |
| G1912439 | NA | non-coding | downstream | 138658 | 20945023 ~ 20947167 (-) |
| G1913296 | NA | non-coding | upstream | 85584 | 21171643 ~ 21175302 (-) |
| G1913393 | NA | non-coding | upstream | 259241 | 21345300 ~ 21345641 (-) |
| G1913410 | NA | non-coding | upstream | 303144 | 21389203 ~ 21389481 (-) |
| G1913412 | NA | non-coding | upstream | 306301 | 21392360 ~ 21393268 (-) |
| G1913413 | NA | non-coding | upstream | 309190 | 21395249 ~ 21443283 (-) |
| G1912470 | NA | other | downstream | 109589 | 20972679 ~ 20976236 (-) |
| G1911862 | NA | other | downstream | 624388 | 20460668 ~ 20461437 (-) |
| G1910996 | NA | other | downstream | 1394312 | 19691066 ~ 19691513 (-) |
| G1910651 | NA | other | downstream | 1594217 | 19490717 ~ 19491608 (-) |
| G1910539 | NA | other | downstream | 1752600 | 19332841 ~ 19333225 (-) |
| G1913665 | NA | other | upstream | 777529 | 21863588 ~ 21864274 (-) |
| G1913663 | NA | other | upstream | 785194 | 21871253 ~ 21872149 (-) |
| G1915836 | NA | other | upstream | 2665784 | 23751843 ~ 23752463 (-) |
| LOC110504083 | NA | other | upstream | 5077406 | 26163462 ~ 26165289 (-) |
| LOC110503381 | LOC106613064 | other | upstream | 5124357 | 26208892 ~ 26241410 (-) |
