G1913296


Basic Information

Item Value
gene id G1913296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 21171643 ~ 21175302 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2188123
ataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactaCAGATgccaggacagggtcctgaagtactacagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaaATAGAAGTGCagtaattcaaaaatattttgatg
>TU2188128
gtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagatgccaggacagggtcctgaagtactatagatgccaggacagggtcctgaagtactatagatgccaggacagggtcctgaagtactatagatgccaggacagggtcctgaagtactatagatgccaggacagggtcctgaagtactatagatGCCAGGACAGggtcctgaagtactatagatgccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccagcacagggtcctgaagtactatagataccagcacagggtcctgaagtactatagataccagcacagggtcctgaagtactatagataccagcacagg
>TU2188130
ataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactaCAGATgccaggacagggtcctgaagtactacagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccaggacagggtcctgaagtactatagataccagcacagggtcctgaagtactatagataccagcacagggtcctgaagtactatagataccagcacagggtcctgaagtactatagataccagcacagg

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase RBBP6-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2188123 False 264 lncRNA 0.45 2 21171643 21175302
TU2188128 False 600 lncRNA 0.48 2 21172932 21173561
TU2188130 True 373 lncRNA 0.48 2 21172932 21175302

Neighbor

gene id symbol gene type direction distance location
LOC110503993 LOC106612995 coding downstream 19968 21139516 ~ 21151675 (-)
LOC118944112 LOC106612996 coding downstream 45059 21117109 ~ 21126584 (-)
LOC110503990 LOC106612996 coding downstream 54366 21112071 ~ 21117277 (-)
LOC110503992 LOC106612997 coding downstream 60339 21088735 ~ 21111304 (-)
LOC110503989 LOC106613000 coding downstream 90479 21067646 ~ 21081164 (-)
LOC110503995 LOC106612993 coding upstream 25831 21201133 ~ 21212559 (-)
LOC118944001 NA coding upstream 312510 21487812 ~ 21499941 (-)
LOC110504001 LOC106581123 coding upstream 329431 21504733 ~ 21520596 (-)
LOC110504006 LOC106612989 coding upstream 350926 21526228 ~ 21535878 (-)
LOC110504009 LOC106612986 coding upstream 451379 21626681 ~ 21642328 (-)
G1913254 NA non-coding downstream 85584 21085825 ~ 21086059 (-)
G1912496 NA non-coding downstream 105302 21066030 ~ 21066341 (-)
G1912483 NA non-coding downstream 164002 21007167 ~ 21007641 (-)
G1912469 NA non-coding downstream 201085 20968447 ~ 20970558 (-)
G1912454 NA non-coding downstream 221426 20948535 ~ 20950217 (-)
G1913393 NA non-coding upstream 169998 21345300 ~ 21345641 (-)
G1913410 NA non-coding upstream 213901 21389203 ~ 21389481 (-)
G1913412 NA non-coding upstream 217058 21392360 ~ 21393268 (-)
G1913413 NA non-coding upstream 219947 21395249 ~ 21443283 (-)
G1913462 NA non-coding upstream 278427 21453729 ~ 21459081 (-)
G1912470 NA other downstream 195407 20972679 ~ 20976236 (-)
G1911862 NA other downstream 710206 20460668 ~ 20461437 (-)
G1910996 NA other downstream 1480130 19691066 ~ 19691513 (-)
G1910651 NA other downstream 1680035 19490717 ~ 19491608 (-)
G1910539 NA other downstream 1838418 19332841 ~ 19333225 (-)
G1913665 NA other upstream 688286 21863588 ~ 21864274 (-)
G1913663 NA other upstream 695951 21871253 ~ 21872149 (-)
G1915836 NA other upstream 2576541 23751843 ~ 23752463 (-)
LOC110504083 NA other upstream 4988163 26163462 ~ 26165289 (-)
LOC110503381 LOC106613064 other upstream 5035114 26208892 ~ 26241410 (-)

Expression


Co-expression Network