G1912565 (LOC106612993)


Basic Information

Item Value
gene id G1912565
gene name LOC106612993
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 21201136 ~ 21202449 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2187319
GAGAGCCTTTACTTTAATCTGGTCAATGTAATTACATACAATCACAACTTTGGCACTGATATACAGTTAACACATTTTAAACAAACATGATCATGCACAACGGTTTCATATCAACACCTTTGCAAAATATTTTCCTAAGACAATTTATCTCCACTTTTGAAATCATGGGTAACTTTGGGTGTTGTACAATTTAGAACATGAATTAGCATAGAAACATATGTGCCCTTACAAATCAGTTTTCTGTATGTGTCTACCAATGGCAAGTTTTTAAAATAATATACAATCACATTGACATTTCAAATATGTATAGCAGTAAAAGTTCATTCTCACTCATACAGATGCAGTGATATTGATCTTCATATTTTTTGACACTTTTGATCAGTGCAATTAAAAAGGTTACAAACCATGCTAGTTCCCATATGAGGACATTGTAAACCAGAAGGGAAGTATGATATCAACATAATGTGTGCATCTTCAATTGTCTGAACTCCTGGTTGTGCTTTGGGAATGAAAATAAGAAACTGCTACGAAACATTCCTCCTTTTATCACAGAAGTTGCCATGAAATAATGGTATTGATACCTGTGGGGAACATTCAAACTTCAAAGCATCATTTACAATATCCTATTTTGAGTTGAGGCTTCTAAGAAGTAAAAAGAAACCTGACTGTTTAAGAGTTCTCTAGGACCTTGTCTCTCAGCTGAGAGCAGTGTGCTTCACTACCATGTTGTAGGCAGTGGAGAATCAGGTAATATGTGCAATGAGGAACTGGGCTGGCATAAGGATAGCATGATTCATTTCTGCTACCCAACCTTCAGTCTTATAACATGTCTAAATTAATCAGAGGTTGATGTACAACTGGAGTGCAAAGAACTGGTAACATCTAAGCTAAGACAAGTGTTCACTGGTCAAATGGGTTAGTTTTTTCCCCCCATGATGTCCAGAGAACAGTCCTATTGGTCAGTGAAGCCCCAACCCCTCCCCTTTCCCAGCCTCCGTAGAACTGGGACTGCCGGTGGCCGCTGTCGTGTCACCCGAGGCCCGCCTCAGTCACTTGATGCGGTGGCGGACCAGCGAGGACTCATCAGTGATCTCGCCGGACCGGTCTCGGTGAcgacaggacaggaggaggagcaggatgaGGAGTACCACAGCACAGACAGCCATCAGGGCATAGGAGATGACCCAGAGAAGGGGCTCCTTCAGCAGCCCTCCAGCAGCACAGTCAGATGCCACGTCTGCAGATGAGAAGGGCCCCAAGATCTCTGACACGGCTA

Function

NR:

description
beta-secretase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2187319 True 1276 TUCP 0.43 2 21201136 21202449

Neighbor

gene id symbol gene type direction distance location
LOC110503996 NA coding upstream 259 21198192 ~ 21200877 (+)
atm atm coding upstream 6534 21151903 ~ 21194602 (+)
LOC118944065 NA coding upstream 67560 21130444 ~ 21133576 (+)
LOC110503464 NA coding upstream 70771 21128900 ~ 21130365 (+)
LOC118944113 NA coding upstream 83878 21111436 ~ 21117258 (+)
dscamb LOC106612992 coding downstream 27020 21229469 ~ 21356455 (+)
LOC110504000 LOC106612988 coding downstream 319155 21521604 ~ 21525948 (+)
LOC110504007 NA coding downstream 330247 21532696 ~ 21537673 (+)
LOC110504008 LOC106612987 coding downstream 340860 21543309 ~ 21557646 (+)
sacs LOC106612984 coding downstream 445922 21648371 ~ 21683308 (+)
G1912558 NA non-coding upstream 25832 21173632 ~ 21175304 (+)
G1912554 NA non-coding upstream 49462 21151131 ~ 21151674 (+)
LOC110503368 NA non-coding upstream 118754 21081201 ~ 21087692 (+)
G1912267 LOC106613001 non-coding upstream 157566 21043207 ~ 21043570 (+)
G1912266 NA non-coding upstream 159003 21041791 ~ 21042133 (+)
G1912568 LOC106612993 non-coding downstream 481 21202930 ~ 21205447 (+)
G1912630 NA non-coding downstream 98586 21301035 ~ 21301432 (+)
G1912631 NA non-coding downstream 99019 21301468 ~ 21301851 (+)
G1912651 NA non-coding downstream 133294 21335743 ~ 21336072 (+)
G1912674 NA non-coding downstream 189422 21391871 ~ 21392171 (+)
G1911474 NA other upstream 893744 20304763 ~ 20307392 (+)
G1911460 LOC105030512 other upstream 915070 20284320 ~ 20286066 (+)
G1910697 NA other upstream 1581406 19619418 ~ 19619730 (+)
G1909739 wdr81 other upstream 2403858 18789221 ~ 18797278 (+)
G1909273 kiaa0100 other upstream 2727309 18473203 ~ 18473827 (+)
G1913153 NA other downstream 991341 22193790 ~ 22194607 (+)
G1915361 LOC106611080 other downstream 2222740 23425189 ~ 23426072 (+)
G1916129 NA other downstream 2809816 24012265 ~ 24012808 (+)
G1916588 NA other downstream 3315911 24518360 ~ 24519017 (+)

Expression


Co-expression Network