G1912631


Basic Information

Item Value
gene id G1912631
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 21301468 ~ 21301851 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2187387
ctcgaggctgtaatcgctgccaaaggtgcttcagcaaagtactgagtaaagggtctgaataccattttagaataaggctgtagcataacgaaatgtggagaaagtcaatgggtctgaatactttccaaatgcactgtatatacactttcacactcttcacatacgctgctaCTACTGTGTTTATTATATATCTTGAttacctagtcacttttaccctgACCTacatgcacattgactcggtaccagtactccttgtatatagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2187387 True 263 lncRNA 0.40 2 21301468 21301851

Neighbor

gene id symbol gene type direction distance location
LOC110503996 NA coding upstream 100591 21198192 ~ 21200877 (+)
atm atm coding upstream 106866 21151903 ~ 21194602 (+)
LOC118944065 NA coding upstream 167892 21130444 ~ 21133576 (+)
LOC110503464 NA coding upstream 171103 21128900 ~ 21130365 (+)
LOC118944113 NA coding upstream 184210 21111436 ~ 21117258 (+)
LOC110504000 LOC106612988 coding downstream 219753 21521604 ~ 21525948 (+)
LOC110504007 NA coding downstream 230845 21532696 ~ 21537673 (+)
LOC110504008 LOC106612987 coding downstream 241458 21543309 ~ 21557646 (+)
sacs LOC106612984 coding downstream 346520 21648371 ~ 21683308 (+)
trappc4 LOC106612982 coding downstream 408695 21710546 ~ 21712020 (+)
G1912630 NA non-coding upstream 36 21301035 ~ 21301432 (+)
G1912568 LOC106612993 non-coding upstream 96021 21202930 ~ 21205447 (+)
G1912558 NA non-coding upstream 126164 21173632 ~ 21175304 (+)
G1912554 NA non-coding upstream 149794 21151131 ~ 21151674 (+)
LOC110503368 NA non-coding upstream 219086 21081201 ~ 21087692 (+)
G1912651 NA non-coding downstream 33892 21335743 ~ 21336072 (+)
G1912674 NA non-coding downstream 90020 21391871 ~ 21392171 (+)
G1912713 NA non-coding downstream 144682 21446533 ~ 21446775 (+)
G1912715 NA non-coding downstream 146711 21448562 ~ 21448885 (+)
G1912729 NA non-coding downstream 172648 21474499 ~ 21474776 (+)
G1912565 LOC106612993 other upstream 99019 21201136 ~ 21202449 (+)
G1911474 NA other upstream 994076 20304763 ~ 20307392 (+)
G1911460 LOC105030512 other upstream 1015402 20284320 ~ 20286066 (+)
G1910697 NA other upstream 1681738 19619418 ~ 19619730 (+)
G1909739 wdr81 other upstream 2504190 18789221 ~ 18797278 (+)
G1913153 NA other downstream 891939 22193790 ~ 22194607 (+)
G1915361 LOC106611080 other downstream 2123338 23425189 ~ 23426072 (+)
G1916129 NA other downstream 2710414 24012265 ~ 24012808 (+)
G1916588 NA other downstream 3216509 24518360 ~ 24519017 (+)

Expression


Co-expression Network