G1912651


Basic Information

Item Value
gene id G1912651
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 21335743 ~ 21336072 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2187407
ccatggggcactctgttgacATAAagttgacatcaacaaaccgctccctcacacaacacaatacacgctgtctgccatctactgcagtcaggtcaagaccctggttagTGCGaaaagcatgcagatgagcttccctgagacggtttctgacagtttgcatAGTTTTTATTCGGATGTACAAACCCACAATTTCATCAACTGTCCCggtagctggtctcagac

Function

NR:

description
Transposable element Tcb2 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2187407 True 222 lncRNA 0.48 2 21335743 21336072

Neighbor

gene id symbol gene type direction distance location
LOC110503996 NA coding upstream 134866 21198192 ~ 21200877 (+)
atm atm coding upstream 141141 21151903 ~ 21194602 (+)
LOC118944065 NA coding upstream 202167 21130444 ~ 21133576 (+)
LOC110503464 NA coding upstream 205378 21128900 ~ 21130365 (+)
LOC118944113 NA coding upstream 218485 21111436 ~ 21117258 (+)
LOC110504000 LOC106612988 coding downstream 185532 21521604 ~ 21525948 (+)
LOC110504007 NA coding downstream 196624 21532696 ~ 21537673 (+)
LOC110504008 LOC106612987 coding downstream 207237 21543309 ~ 21557646 (+)
sacs LOC106612984 coding downstream 312299 21648371 ~ 21683308 (+)
trappc4 LOC106612982 coding downstream 374474 21710546 ~ 21712020 (+)
G1912631 NA non-coding upstream 33892 21301468 ~ 21301851 (+)
G1912630 NA non-coding upstream 34311 21301035 ~ 21301432 (+)
G1912568 LOC106612993 non-coding upstream 130296 21202930 ~ 21205447 (+)
G1912558 NA non-coding upstream 160439 21173632 ~ 21175304 (+)
G1912554 NA non-coding upstream 184069 21151131 ~ 21151674 (+)
G1912674 NA non-coding downstream 55799 21391871 ~ 21392171 (+)
G1912713 NA non-coding downstream 110461 21446533 ~ 21446775 (+)
G1912715 NA non-coding downstream 112490 21448562 ~ 21448885 (+)
G1912729 NA non-coding downstream 138427 21474499 ~ 21474776 (+)
G1912734 NA non-coding downstream 150038 21486110 ~ 21486338 (+)
G1912565 LOC106612993 other upstream 133294 21201136 ~ 21202449 (+)
G1911474 NA other upstream 1028351 20304763 ~ 20307392 (+)
G1911460 LOC105030512 other upstream 1049677 20284320 ~ 20286066 (+)
G1910697 NA other upstream 1716013 19619418 ~ 19619730 (+)
G1909739 wdr81 other upstream 2538465 18789221 ~ 18797278 (+)
G1913153 NA other downstream 857718 22193790 ~ 22194607 (+)
G1915361 LOC106611080 other downstream 2089117 23425189 ~ 23426072 (+)
G1916129 NA other downstream 2676193 24012265 ~ 24012808 (+)
G1916588 NA other downstream 3182288 24518360 ~ 24519017 (+)

Expression


Co-expression Network