G1913412


Basic Information

Item Value
gene id G1913412
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 21392360 ~ 21393268 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2188263
aCACAAGGAGCGCTCCAAACAGGTCAACGACAAAGTTGTagggaagtacagatcagggttgggttataaaaaaaaatatcagaaactttgaacatcccacggagcaccattaaatccattattaagaaatggaaagaatatggcaccacaacaaaactGCCGAGagagccgcccaccaaaactcacagaccaggaaaggagggcattaatcagagaggcaacaaagagaccaaagataaccctgaaggagctgcaaagctccacagcggagattggattatctgtccataggaccactttaagccatacactccacagagctaggctttatggaagagtgtccagaaaaaaataagcaaacacatttggtgctcgccaaaaggcatgtgggagactctccaaacatatggaagaaggtactctggtcaaatAAGACTGAAATTGAGCATCAAGGAAacactatgtctggtgcaaacccaacacctctcatccctCTGAGAATACattccccacagtgaagcatggtggtggcagcatcatgctgtggggatttatttcatcagcagggactgggaaactggtcagaattgaaggaatgatggatggtgctaaatacagggaaattcttgggggaaacctgtttcagtcttccagagatttgagactgggatggaggttcaccttacagcaggacaatgacgctaagcatactgctaaagcaacacttgagtgctTTACGGGGAAACACAATGGCACCCATCCAAATTGAAGGAGCTgcagcagttttgccttgaagaatgggcaaaaatctcagtagctagatgtgccaagcttatagacacataccccaagagacttaaagctgtaattgctgcaaaaggtgtctctacaatgTGTTGacttttgggg
>TU2188257
agagctaggctttatggaagagtgtccagaaaaaaataagcaaacacatttggtgctcgccaaaaggcatgtgggagactctccaaacatatggaagaaggtactctggtcaaatAAGACTGAAATTGAGCATCAAGGAAacactatgtctggtgcaaacccaacacctctcatccctCTGAGAATACattccccacagtgaagcatggtggtggcagcatcatgctgtggggatttatttcatcagcagggactgggaaactggtcagaattgaaggaatgatggatggtgctaaatacagggaaattcttgggggaaacctgtttcagtcttccagagatttgagactgggatggaggttcaccttacagcaggacaatgacgctaagcatact

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2188263 False 909 lncRNA 0.45 1 21392360 21393268
TU2188257 True 396 lncRNA 0.45 1 21392557 21392952

Neighbor

gene id symbol gene type direction distance location
LOC110503995 LOC106612993 coding downstream 179801 21201133 ~ 21212559 (-)
LOC110503993 LOC106612995 coding downstream 240685 21139516 ~ 21151675 (-)
LOC118944112 LOC106612996 coding downstream 265776 21117109 ~ 21126584 (-)
LOC110503990 LOC106612996 coding downstream 275083 21112071 ~ 21117277 (-)
LOC110503992 LOC106612997 coding downstream 281056 21088735 ~ 21111304 (-)
LOC118944001 NA coding upstream 94544 21487812 ~ 21499941 (-)
LOC110504001 LOC106581123 coding upstream 111465 21504733 ~ 21520596 (-)
LOC110504006 LOC106612989 coding upstream 132960 21526228 ~ 21535878 (-)
LOC110504009 LOC106612986 coding upstream 233413 21626681 ~ 21642328 (-)
LOC110504013 LOC106612981 coding upstream 291369 21684637 ~ 21703459 (-)
G1913410 NA non-coding downstream 2879 21389203 ~ 21389481 (-)
G1913393 NA non-coding downstream 46719 21345300 ~ 21345641 (-)
G1913296 NA non-coding downstream 217058 21171643 ~ 21175302 (-)
G1913254 NA non-coding downstream 306301 21085825 ~ 21086059 (-)
G1912496 NA non-coding downstream 326019 21066030 ~ 21066341 (-)
G1913413 NA non-coding upstream 1981 21395249 ~ 21443283 (-)
G1913462 NA non-coding upstream 60461 21453729 ~ 21459081 (-)
G1913469 NA non-coding upstream 78661 21471929 ~ 21472163 (-)
G1913474 NA non-coding upstream 89071 21482339 ~ 21482607 (-)
G1913483 NA non-coding upstream 101999 21495267 ~ 21495508 (-)
G1912470 NA other downstream 416124 20972679 ~ 20976236 (-)
G1911862 NA other downstream 930923 20460668 ~ 20461437 (-)
G1910996 NA other downstream 1700847 19691066 ~ 19691513 (-)
G1910651 NA other downstream 1900752 19490717 ~ 19491608 (-)
G1910539 NA other downstream 2059135 19332841 ~ 19333225 (-)
G1913665 NA other upstream 470320 21863588 ~ 21864274 (-)
G1913663 NA other upstream 477985 21871253 ~ 21872149 (-)
G1915836 NA other upstream 2358575 23751843 ~ 23752463 (-)
LOC110504083 NA other upstream 4770197 26163462 ~ 26165289 (-)
LOC110503381 LOC106613064 other upstream 4817148 26208892 ~ 26241410 (-)

Expression


Co-expression Network