Gene
RNA
| Item | Value |
|---|---|
| gene id | G1913566 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 21705041 ~ 21705274 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2188441 | True | 234 | lncRNA | 0.34 | 1 | 21705041 | 21705274 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504013 | LOC106612981 | coding | downstream | 1582 | 21684637 ~ 21703459 (-) |
| LOC110504009 | LOC106612986 | coding | downstream | 62713 | 21626681 ~ 21642328 (-) |
| LOC110504006 | LOC106612989 | coding | downstream | 169163 | 21526228 ~ 21535878 (-) |
| LOC110504001 | LOC106581123 | coding | downstream | 184445 | 21504733 ~ 21520596 (-) |
| LOC118944001 | NA | coding | downstream | 205100 | 21487812 ~ 21499941 (-) |
| LOC110504015 | LOC106612983 | coding | upstream | 2826 | 21708100 ~ 21710536 (-) |
| slc37a4a | LOC106612980 | coding | upstream | 6812 | 21712086 ~ 21730320 (-) |
| LOC110504016 | LOC106612978 | coding | upstream | 29833 | 21735107 ~ 21755619 (-) |
| vaspb | vasp | coding | upstream | 52764 | 21758038 ~ 21790360 (-) |
| snrpd2 | snrpd2 | coding | upstream | 91692 | 21796966 ~ 21800465 (-) |
| G1913564 | LOC106612984 | non-coding | downstream | 21737 | 21669061 ~ 21683304 (-) |
| G1913588 | NA | non-coding | downstream | 39762 | 21665040 ~ 21665279 (-) |
| G1913584 | NA | non-coding | downstream | 45206 | 21659553 ~ 21659835 (-) |
| G1913555 | NA | non-coding | downstream | 81381 | 21623229 ~ 21623660 (-) |
| G1913553 | NA | non-coding | downstream | 90086 | 21614747 ~ 21614955 (-) |
| G1913567 | NA | non-coding | upstream | 351 | 21705625 ~ 21706387 (-) |
| G1913624 | NA | non-coding | upstream | 88353 | 21793627 ~ 21794249 (-) |
| G1913661 | NA | non-coding | upstream | 172948 | 21878222 ~ 21879232 (-) |
| LOC110504027 | LOC106612972 | non-coding | upstream | 194373 | 21899621 ~ 21987496 (-) |
| G1913793 | NA | non-coding | upstream | 366566 | 22071840 ~ 22072322 (-) |
| G1912470 | NA | other | downstream | 728805 | 20972679 ~ 20976236 (-) |
| G1911862 | NA | other | downstream | 1243604 | 20460668 ~ 20461437 (-) |
| G1910996 | NA | other | downstream | 2013528 | 19691066 ~ 19691513 (-) |
| G1910651 | NA | other | downstream | 2213433 | 19490717 ~ 19491608 (-) |
| G1910539 | NA | other | downstream | 2371816 | 19332841 ~ 19333225 (-) |
| G1913665 | NA | other | upstream | 158314 | 21863588 ~ 21864274 (-) |
| G1913663 | NA | other | upstream | 165979 | 21871253 ~ 21872149 (-) |
| G1915836 | NA | other | upstream | 2046569 | 23751843 ~ 23752463 (-) |
| LOC110504083 | NA | other | upstream | 4458191 | 26163462 ~ 26165289 (-) |
| LOC110503381 | LOC106613064 | other | upstream | 4505142 | 26208892 ~ 26241410 (-) |
