Gene
RNA
| Item | Value |
|---|---|
| gene id | G1913567 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 21705625 ~ 21706387 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2188442 | True | 763 | lncRNA | 0.45 | 1 | 21705625 | 21706387 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504013 | LOC106612981 | coding | downstream | 2166 | 21684637 ~ 21703459 (-) |
| LOC110504009 | LOC106612986 | coding | downstream | 63297 | 21626681 ~ 21642328 (-) |
| LOC110504006 | LOC106612989 | coding | downstream | 169747 | 21526228 ~ 21535878 (-) |
| LOC110504001 | LOC106581123 | coding | downstream | 185029 | 21504733 ~ 21520596 (-) |
| LOC118944001 | NA | coding | downstream | 205684 | 21487812 ~ 21499941 (-) |
| LOC110504015 | LOC106612983 | coding | upstream | 1713 | 21708100 ~ 21710536 (-) |
| slc37a4a | LOC106612980 | coding | upstream | 5699 | 21712086 ~ 21730320 (-) |
| LOC110504016 | LOC106612978 | coding | upstream | 28720 | 21735107 ~ 21755619 (-) |
| vaspb | vasp | coding | upstream | 51651 | 21758038 ~ 21790360 (-) |
| snrpd2 | snrpd2 | coding | upstream | 90579 | 21796966 ~ 21800465 (-) |
| G1913566 | NA | non-coding | downstream | 351 | 21705041 ~ 21705274 (-) |
| G1913564 | LOC106612984 | non-coding | downstream | 22321 | 21669061 ~ 21683304 (-) |
| G1913588 | NA | non-coding | downstream | 40346 | 21665040 ~ 21665279 (-) |
| G1913584 | NA | non-coding | downstream | 45790 | 21659553 ~ 21659835 (-) |
| G1913555 | NA | non-coding | downstream | 81965 | 21623229 ~ 21623660 (-) |
| G1913624 | NA | non-coding | upstream | 87240 | 21793627 ~ 21794249 (-) |
| G1913661 | NA | non-coding | upstream | 171835 | 21878222 ~ 21879232 (-) |
| LOC110504027 | LOC106612972 | non-coding | upstream | 193260 | 21899621 ~ 21987496 (-) |
| G1913793 | NA | non-coding | upstream | 365453 | 22071840 ~ 22072322 (-) |
| G1913752 | NA | non-coding | upstream | 372908 | 22079295 ~ 22080052 (-) |
| G1912470 | NA | other | downstream | 729389 | 20972679 ~ 20976236 (-) |
| G1911862 | NA | other | downstream | 1244188 | 20460668 ~ 20461437 (-) |
| G1910996 | NA | other | downstream | 2014112 | 19691066 ~ 19691513 (-) |
| G1910651 | NA | other | downstream | 2214017 | 19490717 ~ 19491608 (-) |
| G1910539 | NA | other | downstream | 2372400 | 19332841 ~ 19333225 (-) |
| G1913665 | NA | other | upstream | 157201 | 21863588 ~ 21864274 (-) |
| G1913663 | NA | other | upstream | 164866 | 21871253 ~ 21872149 (-) |
| G1915836 | NA | other | upstream | 2045456 | 23751843 ~ 23752463 (-) |
| LOC110504083 | NA | other | upstream | 4457078 | 26163462 ~ 26165289 (-) |
| LOC110503381 | LOC106613064 | other | upstream | 4504029 | 26208892 ~ 26241410 (-) |
