G1913624


Basic Information

Item Value
gene id G1913624
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 21793627 ~ 21794249 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2188499
TTTGTTTGCTTTTCCCATCCTGAATGTTGTGATGTTGATACCATTTTAATTTAAGTTTAATTGAATGTGCTTTGGAATTTAAATATGTTTGCAGAGCAGTCAGAAGCCAGATGGGAATCTCACAGTTACCTATATGCATCTTAGTCTATATCTCACTGTCTTGTGTTGATTCCTATTCCATATTTTCCATTGAGGCGAGTCCTCTTATAGATGACTATAACTATTGTTGTGCTTCTCTAGTCCCATAGCTACTTCAGTCTTACTCATGGCACTGCATCACACATGTTCTTTTGAGAGTTTTCCCATGCTCTTTTTGGCCCACCCAGTCCTTCCAACCCTGGGGCTGTCCTCCAGGTCTCCCACATATGAGGGAACATATCTTGGGCAGTTCTCTGTAACTGATTTACAGCCCTCAGGTGAAGCCTTCTGggatgtgtgtgtcagagagagaggaagaaggaactTAAAACGAACTTGGATAAAACTCAAACTAACCCCCCTCATCCTTGTCTTTGTAATCTGTAGGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2188499 True 529 lncRNA 0.42 2 21793627 21794249

Neighbor

gene id symbol gene type direction distance location
vaspb vasp coding downstream 3267 21758038 ~ 21790360 (-)
LOC110504016 LOC106612978 coding downstream 38008 21735107 ~ 21755619 (-)
slc37a4a LOC106612980 coding downstream 63307 21712086 ~ 21730320 (-)
LOC110504015 LOC106612983 coding downstream 83091 21708100 ~ 21710536 (-)
LOC110504013 LOC106612981 coding downstream 90168 21684637 ~ 21703459 (-)
snrpd2 snrpd2 coding upstream 2717 21796966 ~ 21800465 (-)
foxg1c LOC106613045 coding upstream 25005 21819254 ~ 21822721 (-)
pglyrp5 polr2i coding upstream 30670 21824919 ~ 21826309 (-)
polr2i rpb9 coding upstream 32601 21826850 ~ 21830323 (-)
LOC110504022 NA coding upstream 50976 21845225 ~ 21849537 (-)
G1913567 NA non-coding downstream 87240 21705625 ~ 21706387 (-)
G1913566 NA non-coding downstream 88353 21705041 ~ 21705274 (-)
G1913564 LOC106612984 non-coding downstream 110323 21669061 ~ 21683304 (-)
G1913588 NA non-coding downstream 128348 21665040 ~ 21665279 (-)
G1913584 NA non-coding downstream 133792 21659553 ~ 21659835 (-)
G1913661 NA non-coding upstream 83973 21878222 ~ 21879232 (-)
LOC110504027 LOC106612972 non-coding upstream 105398 21899621 ~ 21987496 (-)
G1913793 NA non-coding upstream 277591 22071840 ~ 22072322 (-)
G1913752 NA non-coding upstream 285046 22079295 ~ 22080052 (-)
G1913828 NA non-coding upstream 355030 22149279 ~ 22149684 (-)
G1912470 NA other downstream 817391 20972679 ~ 20976236 (-)
G1911862 NA other downstream 1332190 20460668 ~ 20461437 (-)
G1910996 NA other downstream 2102114 19691066 ~ 19691513 (-)
G1910651 NA other downstream 2302019 19490717 ~ 19491608 (-)
G1910539 NA other downstream 2460402 19332841 ~ 19333225 (-)
G1913665 NA other upstream 69339 21863588 ~ 21864274 (-)
G1913663 NA other upstream 77004 21871253 ~ 21872149 (-)
G1915836 NA other upstream 1957594 23751843 ~ 23752463 (-)
LOC110504083 NA other upstream 4369216 26163462 ~ 26165289 (-)
LOC110503381 LOC106613064 other upstream 4416167 26208892 ~ 26241410 (-)

Expression


Co-expression Network