G1915200


Basic Information

Item Value
gene id G1915200
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 23125809 ~ 23130697 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2190164
tcaaagaagtcaccctttgccatgatgacagctttgcacacttttgtcATTCTATCAAAAAGCTTAATGGGGAATTttttatgttttgatttttatttcacctttatttaaccaggtaggctagttgagaacaagttctcatttacaactgcgacatggccaagataaatcaaagcagtgtgacacagacaacaacacagagttacacatggaataacatggaataaacaataaacaagccaataacacaataaacaagtcaatgacacagtagaaaaaaatatacagtgtgtgcaaaaggcatgatgaggtaagcaataaataggccatagtatcgAATAATTACAAGTTAGCAGATGAACACTGAattgataaatgagcagatgatgatgtgcaagtagagatactggtgtgcaaaagagcagaaaagtaaaagaaacggtatggggatgaggtaggtagatcgggtgggctatttacagatggattatgtacagctgcagtgatcagtTAGCtgttcagatagctgatgtttaaagttggtgagggaaatataggtctgatttttgcaattcgttccagtcactggcagcagagaactggaaggaaaggcggcagtgtgaggtgttggctttggggatgatcagtgagatatacctgctggaacgtgtgctacgtgtgggtgttgttattgtgaccagtgagctgagataaggcagggctttacctagcatagacttatagatgacctggacccagtgggtcttgcaacgaATATATAGTGCGGGTCAGCTGACTAGAACATACAGGTCGTGGTGGTGGGTGGTAAAAgatgatttggtaacaaaatggatagcactgtgatagactgcatccagtttgctgagtaaagtATTGGAagttattttgtagatgacatcgccgaagtcgaggattggtaggatagtcagttttattagGGTAAGtctggcagcgtgagtgaaggaggctttgttgcgaaataagaagccgattctagatttgattttggattggagatgtttgatatgagtctggaaggagagtttacagtctagccagacatctaggtatttatagttgtccacatattcaagtcagaaccgtccagggtggtgatgctagtcggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2190164 True 1148 lncRNA 0.41 2 23125809 23130697

Neighbor

gene id symbol gene type direction distance location
LOC110504033 LOC106612966 coding downstream 77068 22999057 ~ 23048741 (-)
LOC110503369 LOC106612967 coding downstream 449533 22462266 ~ 22676276 (-)
mxh LOC106612969 coding downstream 860308 22246578 ~ 22265501 (-)
LOC110504029 LOC106612970 coding downstream 952010 22081435 ~ 22173799 (-)
LOC110504027 LOC106612972 coding downstream 1138313 21899621 ~ 21987496 (-)
LOC110504036 LOC106581096 coding upstream 9270 23139967 ~ 23144967 (-)
LOC110504038 LOC106612963 coding upstream 96100 23226797 ~ 23295189 (-)
LOC110503370 LOC106581078 coding upstream 151186 23281883 ~ 23300679 (-)
LOC110504040 LOC106612962 coding upstream 199422 23330119 ~ 23341771 (-)
LOC110504042 LOC106612961 coding upstream 221415 23352112 ~ 23358660 (-)
G1915179 LOC106612965 non-coding downstream 28223 23091134 ~ 23097586 (-)
G1915166 NA non-coding downstream 51620 23073946 ~ 23074189 (-)
G1915162 NA non-coding downstream 59085 23066357 ~ 23066724 (-)
G1915141 NA non-coding downstream 97567 23025976 ~ 23028242 (-)
G1915142 NA non-coding downstream 101510 23022887 ~ 23024299 (-)
G1915207 NA non-coding upstream 71428 23202125 ~ 23202459 (-)
G1915254 NA non-coding upstream 88889 23219586 ~ 23219798 (-)
G1915279 NA non-coding upstream 164973 23295670 ~ 23295905 (-)
G1915288 NA non-coding upstream 178140 23308837 ~ 23309911 (-)
G1915296 NA non-coding upstream 180820 23311517 ~ 23312147 (-)
G1913663 NA other downstream 1253660 21871253 ~ 21872149 (-)
G1913665 NA other downstream 1261535 21863588 ~ 21864274 (-)
G1912470 NA other downstream 2149573 20972679 ~ 20976236 (-)
G1911862 NA other downstream 2664372 20460668 ~ 20461437 (-)
G1910996 NA other downstream 3434296 19691066 ~ 19691513 (-)
G1915836 NA other upstream 621146 23751843 ~ 23752463 (-)
LOC110504083 NA other upstream 3032768 26163462 ~ 26165289 (-)
LOC110503381 LOC106613064 other upstream 3079719 26208892 ~ 26241410 (-)
LOC110504098 LOC106613118 other upstream 3780087 26910083 ~ 26935725 (-)
G1919707 NA other upstream 4198753 27329450 ~ 27331899 (-)

Expression


Co-expression Network