G1915300


Basic Information

Item Value
gene id G1915300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 23344014 ~ 23344741 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2190273
tcctgtaatCCAATAGCACGTGTTAGCtaaatccaagtttataattttaaaaggcttattgatcatgagaaaacccttttgcaattatggtcgcaaagctgaaaactgttgctctgattaaagaagcaataaaactggtcttctttagactagctgagtatctggagcatcagcatttgtgggttcgattacaggctcaaaatggccagaaacaaagaactttcttctgaaactcgttagtctattcttgttctgagaaatgaaggctattccatgcgagaaattgccaagaaactgaagatcttgtacaacgctgtgcactactcccttcacagaacagcgcaaactggctctatccagaatagaaagaggagtgggaggccccggtgcacaactgagaaagacgacaagtacattagagtgtctagtttgagaaacagacagtcctcaactggcagcttcattaaatagtacccgcaaaacaccagtctcaacatcaacagtcaaGCGGTGACTCCagcatgctggccttctaggcagagttgaaaagaaaaagccatatcccaGACTgagccaataaaaataaaagattaagatgggcaataGAATAAAGAcaatggacagaggaactctgcctagaagccagcatcccggagtcacctcttcaccgatgacgttgagactggtgttttgcgggtactatttaatgaagctgccagttgaggact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2190273 True 728 lncRNA 0.43 1 23344014 23344741

Neighbor

gene id symbol gene type direction distance location
LOC110504040 LOC106612962 coding downstream 2243 23330119 ~ 23341771 (-)
LOC110503370 LOC106581078 coding downstream 43335 23281883 ~ 23300679 (-)
LOC110504038 LOC106612963 coding downstream 48825 23226797 ~ 23295189 (-)
LOC110504036 LOC106581096 coding downstream 199047 23139967 ~ 23144967 (-)
LOC110504033 LOC106612966 coding downstream 295273 22999057 ~ 23048741 (-)
LOC110504042 LOC106612961 coding upstream 7371 23352112 ~ 23358660 (-)
glb1l2 LOC106612957 coding upstream 15412 23360153 ~ 23388694 (-)
LOC110504044 LOC106581230 coding upstream 67438 23412179 ~ 23539189 (-)
LOC118944114 LOC106609580 coding upstream 79112 23423853 ~ 23426869 (-)
trnaa-ugc-180 NA coding upstream 239938 23584679 ~ 23584754 (-)
G1915296 NA non-coding downstream 31867 23311517 ~ 23312147 (-)
G1915288 NA non-coding downstream 34103 23308837 ~ 23309911 (-)
G1915279 NA non-coding downstream 48109 23295670 ~ 23295905 (-)
G1915254 NA non-coding downstream 124216 23219586 ~ 23219798 (-)
G1915207 NA non-coding downstream 141555 23202125 ~ 23202459 (-)
G1915302 NA non-coding upstream 1193 23345934 ~ 23346391 (-)
G1915303 NA non-coding upstream 2004 23346745 ~ 23347071 (-)
G1915304 NA non-coding upstream 2786 23347527 ~ 23347809 (-)
G1915305 NA non-coding upstream 3085 23347826 ~ 23348406 (-)
G1915306 NA non-coding upstream 4302 23349043 ~ 23349512 (-)
G1913663 NA other downstream 1471865 21871253 ~ 21872149 (-)
G1913665 NA other downstream 1479740 21863588 ~ 21864274 (-)
G1912470 NA other downstream 2367778 20972679 ~ 20976236 (-)
G1911862 NA other downstream 2882577 20460668 ~ 20461437 (-)
G1910996 NA other downstream 3652501 19691066 ~ 19691513 (-)
G1915836 NA other upstream 407102 23751843 ~ 23752463 (-)
LOC110504083 NA other upstream 2818724 26163462 ~ 26165289 (-)
LOC110503381 LOC106613064 other upstream 2865675 26208892 ~ 26241410 (-)
LOC110504098 LOC106613118 other upstream 3566043 26910083 ~ 26935725 (-)
G1919707 NA other upstream 3984709 27329450 ~ 27331899 (-)

Expression


Co-expression Network