G1916071


Basic Information

Item Value
gene id G1916071
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 23957062 ~ 23957387 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2191100
tttatacccttgggtcagaaatgggcgtaaccgcctttagggaaattctctgggcgtaccgaGTTAAGAGCAAGGTCTAGGTTtttctcaaatccaattttagacaactaacttaacatttcatctttaccaaaacattccctttgatttggacattttccacacaacgtacaatgtataaacatcaaacatatactaggaaaactcttcacatTACAATTTTTttgtaataacgtcatctattaacctttaataacaaaacaaaaatgacatacattttcatattccatctatcgtcatgaccaccattgtggctgacggaaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2191100 True 326 lncRNA 0.35 1 23957062 23957387

Neighbor

gene id symbol gene type direction distance location
LOC118944003 NA coding upstream 4500 23936317 ~ 23952562 (+)
LOC110504048 NA coding upstream 68884 23855143 ~ 23888178 (+)
LOC110503376 LOC106613110 coding upstream 161064 23792880 ~ 23795998 (+)
LOC110503375 LOC106612943 coding upstream 190844 23752934 ~ 23766218 (+)
LOC118944115 NA coding upstream 455385 23487167 ~ 23501677 (+)
pipox pipox coding downstream 696587 24653974 ~ 24670701 (+)
LOC110503380 LOC106613089 coding downstream 1151713 25109100 ~ 25111398 (+)
LOC110504061 LOC106613084 coding downstream 1163351 25120738 ~ 25239451 (+)
akap1b LOC106613083 coding downstream 1287775 25245162 ~ 25259509 (+)
msi1a LOC106613081 coding downstream 1311452 25268839 ~ 25603426 (+)
G1916060 yo84 non-coding upstream 8699 23948073 ~ 23948363 (+)
G1916050 NA non-coding upstream 16117 23940685 ~ 23940945 (+)
G1916045 NA non-coding upstream 18361 23938468 ~ 23938701 (+)
G1916043 NA non-coding upstream 19961 23936752 ~ 23937101 (+)
G1916025 NA non-coding upstream 29361 23927300 ~ 23927701 (+)
G1916115 NA non-coding downstream 42423 23999810 ~ 24000126 (+)
G1916131 NA non-coding downstream 55479 24012866 ~ 24013410 (+)
G1916142 NA non-coding downstream 65862 24023249 ~ 24023547 (+)
G1916143 NA non-coding downstream 66684 24024071 ~ 24024290 (+)
G1916151 NA non-coding downstream 75065 24032452 ~ 24032697 (+)
G1915361 LOC106611080 other upstream 530990 23425189 ~ 23426072 (+)
G1913153 NA other upstream 1762455 22193790 ~ 22194607 (+)
sacs LOC106612984 other upstream 2295364 21648371 ~ 21683308 (+)
G1912565 LOC106612993 other upstream 2754613 21201136 ~ 21202449 (+)
G1911474 NA other upstream 3649670 20304763 ~ 20307392 (+)
G1916129 NA other downstream 54878 24012265 ~ 24012808 (+)
G1916588 NA other downstream 560973 24518360 ~ 24519017 (+)
G1916660 NA other downstream 684311 24641698 ~ 24642134 (+)
G1916811 NA other downstream 967747 24925134 ~ 24927054 (+)
G1917109 NA other downstream 1428932 25386319 ~ 25387517 (+)

Expression


Co-expression Network