G1916298


Basic Information

Item Value
gene id G1916298
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 24177355 ~ 24181715 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2191335
CAACAAAAGTCCTGGTCTCTGTAGTGACCTGACCTAGATCATTGAATGGCTTGAAAaaatactgtcctttaccatagagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatagagtacacaaccatttactgtcctttatcagacagtacacaaccatttactgtcctttaccagacagtacacaaccatttactgtcctttaccagacagtacacaaccatttactgtcctttaccatacagtacacaaccacttactgtcctttaccatacagtacacaaccatctactgtcctttaccagacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatctacTGTCCTTTAtcagacagtacacaaccatttactgtcctttaccatacagtacacaaccatctactgtcctttaccagacagtacacaaccatttactgtcctttaccatacagtacacaaccacttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttaatgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatctactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatctacagtcctttac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106570272, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2191335 True 968 lncRNA 0.39 2 24177355 24181715

Neighbor

gene id symbol gene type direction distance location
LOC118944003 NA coding upstream 224793 23936317 ~ 23952562 (+)
LOC110504048 NA coding upstream 289177 23855143 ~ 23888178 (+)
LOC110503376 LOC106613110 coding upstream 381357 23792880 ~ 23795998 (+)
LOC110503375 LOC106612943 coding upstream 411137 23752934 ~ 23766218 (+)
LOC118944115 NA coding upstream 675678 23487167 ~ 23501677 (+)
pipox pipox coding downstream 472259 24653974 ~ 24670701 (+)
LOC110503380 LOC106613089 coding downstream 927385 25109100 ~ 25111398 (+)
LOC110504061 LOC106613084 coding downstream 939023 25120738 ~ 25239451 (+)
akap1b LOC106613083 coding downstream 1063447 25245162 ~ 25259509 (+)
msi1a LOC106613081 coding downstream 1087124 25268839 ~ 25603426 (+)
G1916169 NA non-coding upstream 116237 24060894 ~ 24061118 (+)
G1916158 NA non-coding upstream 133942 24038617 ~ 24043413 (+)
G1916152 NA non-coding upstream 144225 24032872 ~ 24033130 (+)
G1916151 NA non-coding upstream 144658 24032452 ~ 24032697 (+)
G1916143 NA non-coding upstream 153065 24024071 ~ 24024290 (+)
G1916325 NA non-coding downstream 18281 24199996 ~ 24200226 (+)
G1916350 NA non-coding downstream 45430 24227145 ~ 24227514 (+)
G1916357 NA non-coding downstream 58538 24240253 ~ 24240564 (+)
G1916364 NA non-coding downstream 68152 24249867 ~ 24250136 (+)
G1916370 NA non-coding downstream 69295 24251010 ~ 24251365 (+)
G1916129 NA other upstream 164547 24012265 ~ 24012808 (+)
G1915361 LOC106611080 other upstream 751283 23425189 ~ 23426072 (+)
G1913153 NA other upstream 1982748 22193790 ~ 22194607 (+)
sacs LOC106612984 other upstream 2515657 21648371 ~ 21683308 (+)
G1912565 LOC106612993 other upstream 2974906 21201136 ~ 21202449 (+)
G1916588 NA other downstream 336645 24518360 ~ 24519017 (+)
G1916660 NA other downstream 459983 24641698 ~ 24642134 (+)
G1916811 NA other downstream 743419 24925134 ~ 24927054 (+)
G1917109 NA other downstream 1204604 25386319 ~ 25387517 (+)
G1917119 NA other downstream 1220530 25402245 ~ 25403061 (+)

Expression


Co-expression Network