G1916299


Basic Information

Item Value
gene id G1916299
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 24179019 ~ 24180994 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2191336
gtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatctacagtcctttaccatacagtacacaaccatctacagtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatctacagtcctttaccatacagtacacaaccatttactatcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccatacagtacacaaccatttactgtcctttaccagacagtacacaaccatttactgtcctttaccagacagtacacaaccatttactgtcctttaccagacagtacacaaccatttactgtcctttaccagacagtacacaaccatttactgtcctttaccatacagtacacaaccatctacagtcctttaccatacagtacacagccATTTACtatcctttaccatacagtacacaaccatttactgtcctttaccagacagtacacaaccacttactgtcctttaccagacagtacacaaccatttactgtcctttaccagacagtacacaaccatttactgtcctttaccatacagtacacaaccatctacagtcctttaccatacagtacacaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106570272, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2191336 True 792 lncRNA 0.39 2 24179019 24180994

Neighbor

gene id symbol gene type direction distance location
LOC118944003 NA coding upstream 226457 23936317 ~ 23952562 (+)
LOC110504048 NA coding upstream 290841 23855143 ~ 23888178 (+)
LOC110503376 LOC106613110 coding upstream 383021 23792880 ~ 23795998 (+)
LOC110503375 LOC106612943 coding upstream 412801 23752934 ~ 23766218 (+)
LOC118944115 NA coding upstream 677342 23487167 ~ 23501677 (+)
pipox pipox coding downstream 472980 24653974 ~ 24670701 (+)
LOC110503380 LOC106613089 coding downstream 928106 25109100 ~ 25111398 (+)
LOC110504061 LOC106613084 coding downstream 939744 25120738 ~ 25239451 (+)
akap1b LOC106613083 coding downstream 1064168 25245162 ~ 25259509 (+)
msi1a LOC106613081 coding downstream 1087845 25268839 ~ 25603426 (+)
G1916169 NA non-coding upstream 117901 24060894 ~ 24061118 (+)
G1916158 NA non-coding upstream 135606 24038617 ~ 24043413 (+)
G1916152 NA non-coding upstream 145889 24032872 ~ 24033130 (+)
G1916151 NA non-coding upstream 146322 24032452 ~ 24032697 (+)
G1916143 NA non-coding upstream 154729 24024071 ~ 24024290 (+)
G1916325 NA non-coding downstream 19002 24199996 ~ 24200226 (+)
G1916350 NA non-coding downstream 46151 24227145 ~ 24227514 (+)
G1916357 NA non-coding downstream 59259 24240253 ~ 24240564 (+)
G1916364 NA non-coding downstream 68873 24249867 ~ 24250136 (+)
G1916370 NA non-coding downstream 70016 24251010 ~ 24251365 (+)
G1916129 NA other upstream 166211 24012265 ~ 24012808 (+)
G1915361 LOC106611080 other upstream 752947 23425189 ~ 23426072 (+)
G1913153 NA other upstream 1984412 22193790 ~ 22194607 (+)
sacs LOC106612984 other upstream 2517321 21648371 ~ 21683308 (+)
G1912565 LOC106612993 other upstream 2976570 21201136 ~ 21202449 (+)
G1916588 NA other downstream 337366 24518360 ~ 24519017 (+)
G1916660 NA other downstream 460704 24641698 ~ 24642134 (+)
G1916811 NA other downstream 744140 24925134 ~ 24927054 (+)
G1917109 NA other downstream 1205325 25386319 ~ 25387517 (+)
G1917119 NA other downstream 1221251 25402245 ~ 25403061 (+)

Expression


Co-expression Network