G1916582



Basic Information


Item Value
gene id G1916582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 24495906 ~ 24496595 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2191634
GTAGCACTCAGTAAAGAGAACCCATAGCACACACTGCGCCCTCTGGAATTCCTTACCATAAAGTTATTCTCATGGTCTAGAATTCCTTACCGTAAAGTTAATCTCATGGTCTAAAAATTCCTTACCGTAAAGTTATTCTCATGGTCTAAAAATTCCTTACCGTAAAGTTATTCTCATGGTCTAGAATTCCTTACCGTAAAGTTATTCTCATGGTCTACAATTCCTTACCGTAAAGTTATTCTCATGGTCTACAATTCCATACCGTAAAGATATTCTCATGGTCTACAATTCCTTACCGTAAAGTTATTCTCATGGTCTACAACTCCTTACTGTAAAGTTATTCTCATGGTGTAGAATTCCTTACCATAAAGTtattgtctcagcctccagtatttatgctgcagtagtttatgtgtcggggggctagggtcagtttgttatatctggagtacttctcctgtcctagtcggtgtcctgtgtgaatttaagtgtgctctctctaattctctctttctctcggaggacctgagccctaggaccatgcctcaggactacctgacatgatgactccttgctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgccttattattattggaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2191634 True 690 lncRNA 0.41 1 24495906 24496595

Neighbor


gene id symbol gene type direction distance location
LOC118944003 NA coding upstream 543344 23936317 ~ 23952562 (+)
LOC110504048 NA coding upstream 607728 23855143 ~ 23888178 (+)
LOC110503376 LOC106613110 coding upstream 699908 23792880 ~ 23795998 (+)
LOC110503375 LOC106612943 coding upstream 729688 23752934 ~ 23766218 (+)
LOC118944115 NA coding upstream 994229 23487167 ~ 23501677 (+)
pipox pipox coding downstream 157379 24653974 ~ 24670701 (+)
LOC110503380 LOC106613089 coding downstream 612505 25109100 ~ 25111398 (+)
LOC110504061 LOC106613084 coding downstream 624143 25120738 ~ 25239451 (+)
akap1b LOC106613083 coding downstream 748567 25245162 ~ 25259509 (+)
msi1a LOC106613081 coding downstream 772244 25268839 ~ 25603426 (+)
G1916581 NA non-coding upstream 4450 24490805 ~ 24491456 (+)
G1916580 LOC100194703 non-coding upstream 14075 24481164 ~ 24481831 (+)
G1916579 NA non-coding upstream 15768 24479516 ~ 24480138 (+)
G1916575 NA non-coding upstream 18055 24476199 ~ 24477851 (+)
G1916578 NA non-coding upstream 20204 24475478 ~ 24475702 (+)
G1916587 NA non-coding downstream 20393 24516988 ~ 24518323 (+)
G1916610 NA non-coding downstream 56599 24553194 ~ 24553582 (+)
G1916614 NA non-coding downstream 63024 24559619 ~ 24559887 (+)
G1916662 NA non-coding downstream 146742 24643337 ~ 24643625 (+)
G1916669 NA non-coding downstream 155031 24651626 ~ 24651941 (+)
G1916129 NA other upstream 483098 24012265 ~ 24012808 (+)
G1915361 LOC106611080 other upstream 1069834 23425189 ~ 23426072 (+)
G1913153 NA other upstream 2301299 22193790 ~ 22194607 (+)
sacs LOC106612984 other upstream 2834208 21648371 ~ 21683308 (+)
G1912565 LOC106612993 other upstream 3293457 21201136 ~ 21202449 (+)
G1916588 NA other downstream 21765 24518360 ~ 24519017 (+)
G1916660 NA other downstream 145103 24641698 ~ 24642134 (+)
G1916811 NA other downstream 428539 24925134 ~ 24927054 (+)
G1917109 NA other downstream 889724 25386319 ~ 25387517 (+)
G1917119 NA other downstream 905650 25402245 ~ 25403061 (+)

Expression



Co-expression Network