G1919104


Basic Information

Item Value
gene id G1919104
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 26408222 ~ 26412644 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2194523
gctatatggtgtcctgtgatcagactgttctctgtagtgtaggtgtgtggtGCTATATGGTGTCCTTTGATCAGActgttctctgtagtgtaggtgtgtggtgctatatggtgtcctgtgatcaggctgttctctgtagtgtaggtgtgtggtgctatatggtgtcctgtgatcaggctgttctctgtagtgtaggtgtgtggtGCTATATGGTGTCCTTTGATCAGACTGTTCTCTGGTATAgtgtctttttttctttcttttttttatctTGACAAGGCTTTCAGTGGTGACCGAGCTCCTCCAGTATTGACAAGCCCAGCCTctgtgtctctcaattcaattcaagggctttattggcatggtaaacgtatgttaacattgccaaagcaagtgaaatacagttgaagtcagaagtttacatacaccttagccaaatacatttaaactcagtttttcacaattcctgacatttaatcctagtaaaaatcccctgttttaggtcagttaggatcaccactttattttaagaatgtgaaatgtcacaataataGTATAGAGTGATTTagatttatttctttcatcacattcccaatgggtcagaagtttacatacactcaattagtatttggtagcattgcctttaaattgtttaacttgggtcaaatgtttagggtagccttccacaaacttcccacaataagttaggtgaattttggcccattcctcctgacagaactggtgtaactgagtcaggtttgttggcctccttgctcgcacatgctttttcagttctgcccacaaaatttctataggattgaggccagggctttgtgatggccactccaataccttgactttgttgtccttaagccattttgccacaactttgtaagtatgcttgggtcattgtccatttggaagatccatttgcgaccaagctttaactttaactgatgtcctgagattttgcttcaatatatccacataattttcctaactcatgatgccatctattttgtgaggtgcaccagtccctactgcagcaaagcacccccacaatatgatgctgccagccccgtgcttcacagttgttctttggcttgcaagcctccccctttttcctccaaacacaacaatggtcattatggccaaacagttatatgtttgtttcgtcagaccagaggacatttctccaaaaagtacgatctttgtcctcatgtgctgttgcaaaccatagtctggcttttttaatagtggttttggagcagtggcttcttccttgctgagcggcctctcaggttatgtcgatataggactcgttttactgtggatatagatacttttacgtttcctccagcatcttcacaaggtcctttgctgttgttctgggattgattttccctttttgcaccaaagtactttcatttcTAGGAGACTGAACGGGTCTCCTTGCTGAGcgttatgacagctgcgtggtcccatggtgtttatacttgcgtactattgtttgtacagatgaatgtggtaccttcaggcatttggaaattgctcccaaggatgacccagacttgtggaggtctacaattttttttctgaggtcttagctgatttattttgattttcccatgatgtcaagtaaagaggcactgagtttgaaggtaggccttgaaatacatccaattggtacacctccaattgactcaaattatgtcaattagcctatcagaagcttctaaagccatgacattttctgaaatgttccaagctgtttaaaggcacagtcaacttagtgtatgcaaacttctgacccactggaattgtgatacactgaattataagtgaaataatctgtctgtaaaccaattgttggaaaaatggtttgtcatgcacaaagtagatgtcctaaccgcctTGCtataac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2194523 True 1924 lncRNA 0.41 2 26408222 26412644

Neighbor

gene id symbol gene type direction distance location
LOC110503381 LOC106613064 coding downstream 166812 26208892 ~ 26241410 (-)
med17 med17 coding downstream 223605 26178734 ~ 26184617 (-)
LOC110504083 NA coding downstream 242933 26163462 ~ 26165289 (-)
LOC118944077 LOC106613068 coding downstream 256819 26146652 ~ 26151403 (-)
LOC110504082 LOC106613068 coding downstream 264580 26138097 ~ 26143642 (-)
LOC110504093 NA coding upstream 203779 26616423 ~ 26622390 (-)
LOC110504092 LOC106613119 coding upstream 473515 26886159 ~ 26895600 (-)
LOC110504098 LOC106613118 coding upstream 497439 26910083 ~ 26935725 (-)
LOC110504099 NA coding upstream 523689 26936333 ~ 26938461 (-)
LOC110504100 NA coding upstream 543139 26955783 ~ 27027806 (-)
G1919090 NA non-coding downstream 20722 26387298 ~ 26387500 (-)
G1919083 NA non-coding downstream 33345 26374653 ~ 26374877 (-)
G1919082 NA non-coding downstream 33927 26374001 ~ 26374295 (-)
G1918628 NA non-coding downstream 114472 26293326 ~ 26293750 (-)
G1918615 NA non-coding downstream 123623 26284276 ~ 26284599 (-)
G1919132 NA non-coding upstream 65021 26477665 ~ 26477879 (-)
G1919136 NA non-coding upstream 74448 26487092 ~ 26487694 (-)
G1919286 NA non-coding upstream 311162 26723806 ~ 26741994 (-)
G1919365 NA non-coding upstream 423399 26836043 ~ 26836463 (-)
G1919335 NA non-coding upstream 490183 26902827 ~ 26904109 (-)
G1915836 NA other downstream 2655759 23751843 ~ 23752463 (-)
G1913663 NA other downstream 4536073 21871253 ~ 21872149 (-)
G1913665 NA other downstream 4543948 21863588 ~ 21864274 (-)
G1919707 NA other upstream 916806 27329450 ~ 27331899 (-)
G1920555 NA other upstream 1607686 28020330 ~ 28022222 (-)
G1920872 NA other upstream 2119399 28532043 ~ 28532321 (-)
LOC110504136 LOC106581357 other upstream 2430607 28842756 ~ 28844983 (-)

Expression


Co-expression Network