Gene
RNA
| Item | Value |
|---|---|
| gene id | G1919860 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 27454204 ~ 27454882 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: putative uncharacterized protein DDB_G0290521 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2195375 | True | 571 | lncRNA | 0.40 | 2 | 27454204 | 27454882 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sgpp2 | sgpp2 | coding | downstream | 172674 | 27263515 ~ 27281530 (-) |
| LOC110504109 | LOC106581313 | coding | downstream | 213725 | 27236183 ~ 27240479 (-) |
| LOC110504108 | acsl3 | coding | downstream | 224350 | 27183189 ~ 27229854 (-) |
| LOC110504107 | LOC106613126 | coding | downstream | 275502 | 27177420 ~ 27178702 (-) |
| LOC110504103 | LOC106613122 | coding | downstream | 320919 | 27129667 ~ 27133285 (-) |
| LOC110504117 | LOC106613131 | coding | upstream | 365882 | 27820764 ~ 27846634 (-) |
| LOC110504119 | LOC106613129 | coding | upstream | 440229 | 27895111 ~ 27948919 (-) |
| LOC118944059 | LOC106613133 | coding | upstream | 500367 | 27955249 ~ 27958792 (-) |
| LOC110503384 | LOC106613128 | coding | upstream | 504282 | 27959164 ~ 28447338 (-) |
| mrps22 | LOC106613113 | coding | upstream | 1099910 | 28554792 ~ 28565782 (-) |
| G1919825 | NA | non-coding | downstream | 34741 | 27393211 ~ 27419463 (-) |
| G1919808 | NA | non-coding | downstream | 90803 | 27360461 ~ 27363401 (-) |
| G1919673 | NA | non-coding | downstream | 177404 | 27276440 ~ 27276800 (-) |
| G1919672 | NA | non-coding | downstream | 177777 | 27275883 ~ 27276427 (-) |
| G1919668 | NA | non-coding | downstream | 191392 | 27261794 ~ 27262812 (-) |
| G1919861 | NA | non-coding | upstream | 41279 | 27496161 ~ 27497569 (-) |
| G1919897 | NA | non-coding | upstream | 57790 | 27512672 ~ 27513188 (-) |
| G1919899 | NA | non-coding | upstream | 60371 | 27515253 ~ 27516633 (-) |
| G1919904 | NA | non-coding | upstream | 64978 | 27519860 ~ 27520100 (-) |
| G1919958 | NA | non-coding | upstream | 125397 | 27580279 ~ 27585986 (-) |
| G1919707 | NA | other | downstream | 122305 | 27329450 ~ 27331899 (-) |
| LOC110504098 | LOC106613118 | other | downstream | 518479 | 26910083 ~ 26935725 (-) |
| LOC110503381 | LOC106613064 | other | downstream | 1242333 | 26208892 ~ 26241410 (-) |
| LOC110504083 | NA | other | downstream | 1288959 | 26163462 ~ 26165289 (-) |
| G1915836 | NA | other | downstream | 3701741 | 23751843 ~ 23752463 (-) |
| G1920555 | NA | other | upstream | 565448 | 28020330 ~ 28022222 (-) |
| G1920872 | NA | other | upstream | 1077161 | 28532043 ~ 28532321 (-) |
| LOC110504136 | LOC106581357 | other | upstream | 1388369 | 28842756 ~ 28844983 (-) |
| G1921283 | NA | other | upstream | 1488367 | 28943249 ~ 28944607 (-) |
| G1921496 | NA | other | upstream | 1671406 | 29126288 ~ 29126537 (-) |
