Gene
RNA
| Item | Value |
|---|---|
| gene id | G1920209 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 27999211 ~ 28000041 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2195760 | True | 291 | lncRNA | 0.46 | 2 | 27999211 | 28000041 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504118 | LOC106613130 | coding | upstream | 106673 | 27862743 ~ 27892538 (+) |
| LOC110503383 | epha4 | coding | upstream | 501626 | 27419182 ~ 27497585 (+) |
| LOC110504114 | LOC106613139 | coding | upstream | 667270 | 27291673 ~ 27331941 (+) |
| LOC118944081 | LOC103365077 | coding | upstream | 711840 | 27283504 ~ 27287371 (+) |
| farsb | syfb | coding | upstream | 736387 | 27249335 ~ 27262824 (+) |
| LOC118944005 | NA | coding | downstream | 519181 | 28519222 ~ 28531424 (+) |
| LOC110503152 | LOC106613114 | coding | downstream | 537800 | 28537841 ~ 28540972 (+) |
| LOC110503153 | LOC102793876 | coding | downstream | 541759 | 28541800 ~ 28545796 (+) |
| LOC118944006 | LOC106592201 | coding | downstream | 546022 | 28546063 ~ 28554749 (+) |
| LOC110503150 | LOC106613173 | coding | downstream | 710443 | 28710484 ~ 28712516 (+) |
| G1920195 | NA | non-coding | upstream | 27367 | 27971115 ~ 27971844 (+) |
| G1920190 | NA | non-coding | upstream | 37670 | 27958470 ~ 27961541 (+) |
| G1920143 | NA | non-coding | upstream | 101264 | 27896362 ~ 27897947 (+) |
| G1920134 | NA | non-coding | upstream | 150792 | 27848180 ~ 27848419 (+) |
| G1920132 | NA | non-coding | upstream | 152353 | 27846365 ~ 27846858 (+) |
| G1920229 | NA | non-coding | downstream | 45977 | 28046018 ~ 28046707 (+) |
| G1920242 | NA | non-coding | downstream | 65749 | 28065790 ~ 28067020 (+) |
| G1920379 | NA | non-coding | downstream | 348703 | 28348744 ~ 28350102 (+) |
| G1920389 | NA | non-coding | downstream | 380030 | 28380071 ~ 28383746 (+) |
| G1920394 | NA | non-coding | downstream | 406248 | 28406289 ~ 28453844 (+) |
| G1920101 | LOC106613131 | other | upstream | 176461 | 27820794 ~ 27822750 (+) |
| G1919949 | NA | other | upstream | 380748 | 27617023 ~ 27618463 (+) |
| G1919459 | NA | other | upstream | 943996 | 27054908 ~ 27055215 (+) |
| G1919064 | LOC106613117 | other | upstream | 955937 | 27036345 ~ 27043274 (+) |
| LOC110504089 | LOC106613058 | other | upstream | 1336588 | 26640472 ~ 26662623 (+) |
| LOC110503390 | efhd1 | other | downstream | 927904 | 28927758 ~ 28943440 (+) |
| G1922041 | LOC106613152 | other | downstream | 1709839 | 29709880 ~ 29785287 (+) |
| G1922637 | NA | other | downstream | 2287518 | 30287559 ~ 30289340 (+) |
| G1923728 | NA | other | downstream | 3281902 | 31281943 ~ 31282157 (+) |
| G1923824 | NA | other | downstream | 3454289 | 31454330 ~ 31455689 (+) |
