Gene
RNA
| Item | Value |
|---|---|
| gene id | G1921456 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 29089318 ~ 29089557 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2197305 | True | 240 | lncRNA | 0.45 | 1 | 29089318 | 29089557 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504129 | LOC106613156 | coding | upstream | 49710 | 29026037 ~ 29039608 (+) |
| LOC110503390 | efhd1 | coding | upstream | 145878 | 28927758 ~ 28943440 (+) |
| trnag-ucc-230 | NA | coding | upstream | 161693 | 28927554 ~ 28927625 (+) |
| trnap-agg-155 | NA | coding | upstream | 168003 | 28921244 ~ 28921315 (+) |
| trnai-aau-84 | NA | coding | upstream | 173010 | 28916235 ~ 28916308 (+) |
| LOC110503387 | fat3 | coding | downstream | 222428 | 29311985 ~ 29659405 (+) |
| LOC118944007 | NA | coding | downstream | 574620 | 29664177 ~ 29751463 (+) |
| LOC110504126 | LOC106613152 | coding | downstream | 694861 | 29784418 ~ 29786182 (+) |
| LOC110503157 | LOC106592784 | coding | downstream | 1335478 | 30425035 ~ 30429010 (+) |
| LOC110503160 | ilk | coding | downstream | 1386435 | 30475992 ~ 30497130 (+) |
| G1921435 | NA | non-coding | upstream | 13299 | 29075807 ~ 29076019 (+) |
| G1921431 | NA | non-coding | upstream | 17551 | 29071296 ~ 29071767 (+) |
| G1921421 | NA | non-coding | upstream | 28149 | 29060867 ~ 29061169 (+) |
| G1921382 | NA | non-coding | upstream | 46332 | 29042374 ~ 29042986 (+) |
| G1921381 | NA | non-coding | upstream | 49234 | 29039785 ~ 29040084 (+) |
| G1921480 | NA | non-coding | downstream | 18895 | 29108452 ~ 29108689 (+) |
| G1921484 | NA | non-coding | downstream | 22283 | 29111840 ~ 29112125 (+) |
| G1921495 | LOC100380853 | non-coding | downstream | 34071 | 29123628 ~ 29123960 (+) |
| G1921538 | NA | non-coding | downstream | 83354 | 29172911 ~ 29173125 (+) |
| G1921543 | NA | non-coding | downstream | 86645 | 29176202 ~ 29176402 (+) |
| G1920101 | LOC106613131 | other | upstream | 1266568 | 27820794 ~ 27822750 (+) |
| G1919949 | NA | other | upstream | 1470855 | 27617023 ~ 27618463 (+) |
| G1919459 | NA | other | upstream | 2034103 | 27054908 ~ 27055215 (+) |
| G1919064 | LOC106613117 | other | upstream | 2046044 | 27036345 ~ 27043274 (+) |
| G1922041 | LOC106613152 | other | downstream | 620323 | 29709880 ~ 29785287 (+) |
| G1922637 | NA | other | downstream | 1198002 | 30287559 ~ 30289340 (+) |
| G1923728 | NA | other | downstream | 2192386 | 31281943 ~ 31282157 (+) |
| G1923824 | NA | other | downstream | 2364773 | 31454330 ~ 31455689 (+) |
| G1924021 | NA | other | downstream | 2813970 | 31903527 ~ 31908662 (+) |
